RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1143173" and tax_phylum = "Elusimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Elusimicrobiota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1143173 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1560533 1560533 PRJNA1143173_P_NODE_11322_length_310_cov_3.151899_g11296_i0 PRJNA1143173 11322 310 3.151899 9.7708869 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 121 7.83e-23   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g11296 i0 82.734 0.448387096774194 139 21 45 2 161 298 255554 255418 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 139 121 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
9214017 9214017 PRJNA1143173_P_NODE_16388_length_296_cov_7.896861_g16362_i0 PRJNA1143173 16388 296 7.896861 23.37470856 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 193 1.55e-44   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g16362 i0 79.643 5.91216216216216 280 47 93 9 20 294 148728 148454 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 1750 193 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
10490381 10490381 PRJNA1143173_P_NODE_8609_length_310_cov_6.358650_g8583_i0 PRJNA1143173 8609 310 6.35865 19.711815 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 209 1.62e-49   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g8583 i0 91.946 14.1258064516129 149 12 48 0 162 310 3647664 3647516 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 4379 209 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
14315330 14315330 PRJNA1143173_P_NODE_33392_length_248_cov_3.165714_g33366_i0 PRJNA1143173 33392 248 3.165714 7.85097072 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 195 3.52e-45   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g33366 i0 80.972 0.995967741935484 247 45 99 2 2 247 3727985 3728230 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 247 195 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
15588839 15588839 PRJNA1143173_P_NODE_12953_length_299_cov_12.473451_g12927_i0 PRJNA1143173 12953 299 12.473451 37.29561849 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 150 9.58e-32   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g12927 i0 85.417 44.5685618729097 144 21 48 0 1 144 542475 542618 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 13326 150 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
16863295 16863295 PRJNA1143173_P_NODE_24714_length_273_cov_3.305000_g24688_i0 PRJNA1143173 24714 273 3.305 9.02265 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 233 8.339999999999999e-57   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g24688 i0 83.333 1.16483516483516 258 37 93 4 12 266 252320 252574 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 318 233 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
19412000 19412000 PRJNA1143173_P_NODE_15676_length_298_cov_3.453333_g15650_i0 PRJNA1143173 15676 298 3.453333 10.29093234 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 387 6.68e-103   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g15650 i0 90.033 46.5369127516779 301 27 100 1 1 298 2538745 2538445 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 13868 387 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
20687734 20687734 PRJNA1143173_P_NODE_27277_length_265_cov_7.609375_g27251_i0 PRJNA1143173 27277 265 7.609375 20.16484375 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 241 4.82e-59   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g27251 i0 83.019 2.43018867924528 265 45 100 0 1 265 1962406 1962670 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 644 241 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;