RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1139127" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1139127 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
285220 285220 PRJNA1139127_P_NODE_38981_length_266_cov_2.911917_g38488_i0 PRJNA1139127 38981 266 2.911917 7.74569922 Pandora neoaphidis 76017 Fungi Fungi 460 3.41e-125   NTclustered gi|1390219702|gb|MH366634.1| 76017 g38488 i0 100 80.703007518797 249 0 94 0 18 266 51 299 Pandora neoaphidis voucher Number 19 large subunit ribosomal RNA gene, partial sequence blastn 21467 460 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Pandora Pandora neoaphidis
1032220 1032220 PRJNA1139127_P_NODE_1361_length_1841_cov_3.345588_g1243_i0 PRJNA1139127 1361 1841 3.345588 61.59227508 Capillidium 2878381 Fungi Fungi 990 0   NTclustered gi|2273784342|ref|NC_064684.1| 181046 g1243 i0 83.912 13.4703965236285 1094 116 67 32 798 1841 4026 2943 Conidiobolus rhysosporus strain ATCC 12588 mitochondrion, complete genome blastn 24799 990 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Capillidium Capillidium rhysosporum
5388232 5388232 PRJNA1139127_P_NODE_19285_length_435_cov_8.859116_g18794_i0 PRJNA1139127 19285 435 8.859116 38.5371546 Capillidium heterosporum 1167838 Fungi Fungi 235 3.8899999999999994e-57   NTclustered gi|1583106424|ref|NC_040967.1| 1167838 g18794 i0 91.379 18.1034482758621 174 11 39 4 1 170 2917 2744 Conidiobolus heterosporus strain RCEF6331 mitochondrion, complete genome blastn 7875 235 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Capillidium Capillidium heterosporum
15587832 15587832 PRJNA1139127_P_NODE_12693_length_582_cov_1.375246_g12216_i0 PRJNA1139127 12693 582 1.375246 8.00393172 Neoconidiobolus thromboides 76012 Fungi Fungi 769 0   NTclustered gi|2032035963|gb|MW795364.1| 76012 g12216 i0 92.992 56.1872852233677 528 36 91 1 1 527 34701 34174 Neoconidiobolus thromboides strain ATCC 12587 mitochondrion, complete genome blastn 32701 769 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Neoconidiobolus Neoconidiobolus thromboides

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;