RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1139127" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA1139127 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6663083 6663083 PRJNA1139127_P_NODE_38666_length_268_cov_1.307692_g38173_i0 PRJNA1139127 38666 268 1.307692 3.50461456 Haloterrigena salifodinae 2675099 Archaea Archaea 248 2.92e-61   NTclustered gi|1988313350|gb|CP069188.1| 2675099 g38173 i0 83.712 70.6865671641791 264 41 98 2 4 266 1471522 1471260 Haloterrigena salifodinae strain BOL5-1 chromosome, complete genome blastn 18944 248 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Haloterrigena Haloterrigena salifodinae
11763876 11763876 PRJNA1139127_P_NODE_39290_length_265_cov_1.546875_g38797_i0 PRJNA1139127 39290 265 1.546875 4.09921875 Haloprofundus halobius 2876194 Archaea Archaea 255 1.72e-63   NTclustered gi|2099489103|gb|CP083666.1| 2876194 g38797 i0 89.552 33.0641509433962 201 21 76 0 10 210 23120 23320 Haloprofundus halobius strain SEDH52 chromosome, complete genome blastn 8762 255 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloprofundus Haloprofundus halobius
20686739 20686739 PRJNA1139127_P_NODE_46417_length_246_cov_0.895954_g45924_i0 PRJNA1139127 46417 246 0.895954 2.20404684 Halalkalicoccus jeotgali 413810 Archaea Archaea 261 3.39e-65   NTclustered gi|299123054|gb|CP002062.1| 795797 g45924 i0 86.498 1.89837398373984 237 32 96 0 10 246 2000765 2001001 Halalkalicoccus jeotgali B3, complete genome blastn 467 261 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;