contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA1139127" and tax_clade = "Sar"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4111990 | 4111990 | PRJNA1139127_P_NODE_13984_length_546_cov_1.564482_g13503_i0 | PRJNA1139127 | 13984 | 546 | 1.564482 | 8.54207172 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 662 | 0 | NTclustered | gi|325194231|emb|FR825088.1| | 890382 | g13503 | i0 | 89.655 | 1.5952380952381 | 522 | 50 | 95 | 3 | 1 | 520 | 1531 | 1012 | Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 | blastn | 871 | 662 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 13785624 | 13785624 | PRJNA1139127_P_NODE_26251_length_351_cov_1.111511_g25759_i0 | PRJNA1139127 | 26251 | 351 | 1.111511 | 3.90140361 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 60.2 | 1.98e-4 | NTclustered | gi|915002776|ref|XM_013393443.1| | 5801 | g25759 | i0 | 94.872 | 9.49287749287749 | 39 | 1 | 11 | 1 | 286 | 323 | 11084 | 11046 | Eimeria acervulina UBA/TS-N domain-containing protein, putative partial mRNA | blastn | 3332 | 60.2 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Eimeria | Eimeria acervulina | ||
| 15060003 | 15060003 | PRJNA1139127_P_NODE_43732_length_250_cov_0.875706_g43239_i0 | PRJNA1139127 | 43732 | 250 | 0.875706 | 2.189265 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 451 | 1.91e-122 | NTclustered | gi|1837628855|gb|MN158348.1| | 5909 | g43239 | i0 | 99.2 | 92.464 | 250 | 2 | 100 | 0 | 1 | 250 | 2607 | 2856 | Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 23116 | 451 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena rostrata | ||
| 15588214 | 15588214 | PRJNA1139127_P_NODE_47213_length_245_cov_0.889535_g46720_i0 | PRJNA1139127 | 47213 | 245 | 0.889535 | 2.17936075 | Neospora caninum | 29176 | SAR_Eukaryotes | SAR_Eukaryotes | 355 | 1.51e-93 | NTclustered | gi|820695469|tpe|LN714488.1| | 572307 | g46720 | i0 | 93.004 | 42.8 | 243 | 17 | 99 | 0 | 3 | 245 | 116359 | 116601 | TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome | blastn | 10486 | 355 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Sarcocystidae | Neospora | Neospora caninum | ||
| 18137056 | 18137056 | PRJNA1139127_P_NODE_46555_length_245_cov_2.482558_g46062_i0 | PRJNA1139127 | 46555 | 245 | 2.482558 | 6.0822671 | Synura synuroidea | 47573 | SAR_Eukaryotes | SAR_Eukaryotes | 189 | 1.62e-43 | NTclustered | gi|11466457|ref|NC_002174.1| | 47573 | g46062 | i0 | 82.87 | 21.9632653061224 | 216 | 32 | 87 | 5 | 22 | 235 | 815 | 1027 | Chrysodidymus synuroideus mitochondrion, complete genome | blastn | 5381 | 189 | 1 | Eukaryota | Sar | Synurophyceae | Synurales | Mallomonadaceae | Synura | Synura synuroidea |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;