contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1137393" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4111811 | 4111811 | PRJNA1137393_P_NODE_54164_length_166_cov_0.888889_g53648_i0 | PRJNA1137393 | 54164 | 166 | 0.888889 | 1.47555574 | Desulfosediminicola flagellatus | 2569541 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|1861338670|gb|CP050698.1| | 2569541 | g53648 | i0 | 100 | 0.849397590361446 | 29 | 0 | 17 | 0 | 26 | 54 | 3781549 | 3781521 | Desulfosediminicola flagellatus strain IMCC35005 chromosome, complete genome | blastn | 141 | 54.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfocapsaceae | Desulfosediminicola | Desulfosediminicola flagellatus | ||
| 5388037 | 5388037 | PRJNA1137393_P_NODE_67945_length_163_cov_0.912281_g67429_i0 | PRJNA1137393 | 67945 | 163 | 0.912281 | 1.48701803 | Geobacter metallireducens | 28232 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|78192483|gb|CP000148.1| | 269799 | g67429 | i0 | 92.308 | 1.07361963190184 | 39 | 3 | 24 | 0 | 72 | 110 | 2445666 | 2445704 | Geobacter metallireducens GS-15, complete genome | blastn | 175 | 56.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter metallireducens | ||
| 7409969 | 7409969 | PRJNA1137393_P_NODE_21866_length_196_cov_7.741497_g21350_i0 | PRJNA1137393 | 21866 | 196 | 7.741497 | 15.17333412 | Desulfurivibrio | 427922 | Bacteria | Bacteria | 178 | 2.68e-40 | NTclustered | gi|470485970|ref|NR_076727.1| | 427923 | g21350 | i0 | 84.53 | 110.326530612245 | 181 | 27 | 92 | 1 | 17 | 196 | 936 | 1116 | Desulfurivibrio alkaliphilus strain AHT 2 23S ribosomal RNA gene, complete sequence | blastn | 21624 | 178 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfurivibrio | Desulfurivibrio alkaliphilus | ||
| 7409987 | 7409987 | PRJNA1137393_P_NODE_29366_length_182_cov_2.270677_g28850_i0 | PRJNA1137393 | 29366 | 182 | 2.270677 | 4.13263214 | Geotalea | 2910589 | Bacteria | Bacteria | 195 | 2.43e-45 | NTclustered | gi|470481994|ref|NR_076507.1| | 351604 | g28850 | i0 | 86.339 | 195.851648351648 | 183 | 20 | 99 | 5 | 2 | 181 | 532 | 352 | Geobacter uraniireducens strain Rf4 23S ribosomal RNA gene, complete sequence | blastn | 35645 | 195 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geotalea | Geotalea uraniireducens | ||
| 13038383 | 13038383 | PRJNA1137393_P_NODE_16851_length_213_cov_2.695122_g16335_i0 | PRJNA1137393 | 16851 | 213 | 2.695122 | 5.74060986 | Desulfosarcina widdelii | 947919 | Bacteria | Bacteria | 207 | 3.78e-49 | NTclustered | gi|1773416083|dbj|AP021875.1| | 947919 | g16335 | i0 | 89.157 | 485.413145539906 | 166 | 18 | 78 | 0 | 6 | 171 | 6916668 | 6916503 | Desulfosarcina widdelii PP31 DNA, complete genome | blastn | 103393 | 207 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfosarcina | Desulfosarcina widdelii | ||
| 13038536 | 13038536 | PRJNA1137393_P_NODE_63991_length_164_cov_0.904348_g63475_i0 | PRJNA1137393 | 63991 | 164 | 0.904348 | 1.48313072 | Nitratidesulfovibrio liaohensis | 2604158 | Bacteria | Bacteria | 287 | 3.45e-73 | NTclustered | gi|2575677524|gb|CP133659.1| | 2604158 | g63475 | i0 | 98.171 | 1 | 164 | 3 | 100 | 0 | 1 | 164 | 2419513 | 2419350 | Nitratidesulfovibrio liaohensis strain KPS chromosome, complete genome | blastn | 164 | 287 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Nitratidesulfovibrio | Nitratidesulfovibrio liaohensis | ||
| 15059723 | 15059723 | PRJNA1137393_P_NODE_21912_length_196_cov_2.190476_g21396_i0 | PRJNA1137393 | 21912 | 196 | 2.190476 | 4.29333296 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 233 | 5.639999999999999e-57 | NTclustered | gi|2425841343|dbj|AP027151.1| | 351604 | g21396 | i0 | 88.947 | 279.295918367347 | 190 | 19 | 96 | 2 | 7 | 195 | 753578 | 753390 | Geotalea uraniireducens NIT-SL11 DNA, complete genome | blastn | 54742 | 235 | 0.991489361702128 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geotalea | Geotalea uraniireducens | ||
| 15587576 | 15587576 | PRJNA1137393_P_NODE_22433_length_195_cov_1.287671_g21917_i0 | PRJNA1137393 | 22433 | 195 | 1.287671 | 2.51095845 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 135 | 1.6300000000000002e-27 | NTclustered | gi|2893358420|emb|OZ220712.1| | 2202153 | g21917 | i0 | 80.791 | 93.8461538461538 | 177 | 31 | 90 | 3 | 1 | 176 | 1711875 | 1711701 | MAG: Thermodesulfobacteriota bacterium isolate 564989d4-0a31-48dd-8468-51938819ad86 genome assembly, chromosome: 1 | blastn | 18300 | 135 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 18883580 | 18883580 | PRJNA1137393_P_NODE_10615_length_255_cov_1.009709_g10099_i0 | PRJNA1137393 | 10615 | 255 | 1.009709 | 2.57475795 | Bacteria | 2 | Bacteria | Bacteria | 272 | 1.6299999999999998e-68 | NTclustered | gi|2518551120|emb|OX638332.1| | 2080303 | g10099 | i0 | 86.667 | 117.564705882353 | 255 | 22 | 100 | 3 | 1 | 255 | 22571 | 22813 | MAG: Candidatus Dadabacteria bacterium isolate 28c7ac20-cd97-4a81-9be0-f5b43b5a8d2b genome assembly, chromosome: 1 | blastn | 29979 | 272 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Dadabacteria | Candidatus Dadabacteria bacterium | |||||
| 23984355 | 23984355 | PRJNA1137393_P_NODE_18139_length_209_cov_0.893750_g17623_i0 | PRJNA1137393 | 18139 | 209 | 0.89375 | 1.8679375 | Geobacteraceae | 213422 | Bacteria | Bacteria | 364 | 2.0699999999999992e-96 | NTclustered | gi|1976315905|dbj|AP024469.1| | 2495594 | g17623 | i0 | 98.544 | 527.53110047846906 | 206 | 3 | 99 | 0 | 4 | 209 | 736748 | 736543 | Geobacter sp. SVR DNA, complete genome | blastn | 110254 | 366 | 0.994535519125683 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sp. SVR |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;