RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1137393" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1137393 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21961661 21961661 PRJNA1137393_P_NODE_8998_length_277_cov_1.192982_g8482_i0 PRJNA1137393 8998 277 1.192982 3.30456014 Chemarfal virus 262 3063354 Viruses Viruses 490 4.56e-134   NTclustered gi|2626080003|gb|OR270572.1| 3063354 g8482 i0 98.556 2 277 4 100 0 1 277 760 1036 MAG: Chemarfal virus 262 isolate ML188 genomic sequence blastn 554 490 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Chemarfal virus 262
24510656 24510656 PRJNA1137393_P_NODE_37580_length_171_cov_1.295082_g37064_i0 PRJNA1137393 37580 171 1.295082 2.21459022 Betacoronavirus pandemicum 3418604 Viruses Viruses 316 4.6e-82   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g37064 i0 100 100 171 0 100 0 1 171 13946 13776 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 17100 316 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;