contig_metadata
27 rows where analysis = "blastn", bioproject = "PRJNA1137393" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1559229 | 1559229 | PRJNA1137393_P_NODE_11302_length_247_cov_6.095960_g10786_i0 | PRJNA1137393 | 11302 | 247 | 6.09596 | 15.0570212 | Archangium violaceum | 83451 | Bacteria | Bacteria | 320 | 5.54e-83 | NTclustered | gi|1985695619|gb|CP069396.1| | 83451 | g10786 | i0 | 90.244 | 255.279352226721 | 246 | 22 | 99 | 2 | 3 | 247 | 585330 | 585086 | Archangium violaceum strain SDU8 chromosome, complete genome | blastn | 63054 | 320 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 1559332 | 1559332 | PRJNA1137393_P_NODE_44302_length_168_cov_0.873950_g43786_i0 | PRJNA1137393 | 44302 | 168 | 0.87395 | 1.468236 | Vulgatibacter incomptus | 1391653 | Bacteria | Bacteria | 134 | 4.9000000000000005e-27 | NTclustered | gi|913607065|gb|CP012332.1| | 1391653 | g43786 | i0 | 82.781 | 1.92857142857143 | 151 | 24 | 89 | 2 | 4 | 153 | 4205002 | 4204853 | Vulgatibacter incomptus strain DSM 27710, complete genome | blastn | 324 | 134 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Vulgatibacteraceae | Vulgatibacter | Vulgatibacter incomptus | ||
| 4111770 | 4111770 | PRJNA1137393_P_NODE_4304_length_438_cov_1.359897_g3790_i0 | PRJNA1137393 | 4304 | 438 | 1.359897 | 5.95634886 | Anaeromyxobacter paludicola | 2918171 | Bacteria | Bacteria | 244 | 6.51e-60 | NTclustered | gi|2199271117|dbj|AP025592.1| | 2918171 | g3790 | i0 | 83.271 | 20.7716894977169 | 269 | 41 | 61 | 4 | 28 | 293 | 1383776 | 1383509 | Anaeromyxobacter paludicola DNA, complete genome | blastn | 9098 | 244 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter paludicola | ||
| 6662543 | 6662543 | PRJNA1137393_P_NODE_286_length_1760_cov_8.794857_g170_i0 | PRJNA1137393 | 286 | 1760 | 8.794857 | 154.7894832 | Minicystis rosea | 888845 | Bacteria | Bacteria | 2084 | 0 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g170 | i0 | 88.139 | 153.379545454545 | 1779 | 175 | 100 | 28 | 1 | 1760 | 13716822 | 13715061 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 269948 | 2084 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 8685216 | 8685216 | PRJNA1137393_P_NODE_8347_length_288_cov_7.359833_g7831_i0 | PRJNA1137393 | 8347 | 288 | 7.359833 | 21.19631904 | Nannocystis | 53 | Bacteria | Bacteria | 444 | 3.76e-120 | NTclustered | gi|2244669|emb|X87286.1| | 54 | g7831 | i0 | 94.444 | 215.625 | 288 | 16 | 100 | 0 | 1 | 288 | 2444 | 2157 | N.exedens 23S rRNA gene | blastn | 62100 | 444 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis exedens | |||
| 10488233 | 10488233 | PRJNA1137393_P_NODE_27769_length_185_cov_1.330882_g27253_i0 | PRJNA1137393 | 27769 | 185 | 1.330882 | 2.4621317 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 211 | 2.46e-50 | NTclustered | gi|161158851|emb|AM746676.1| | 448385 | g27253 | i0 | 89.017 | 4.69189189189189 | 173 | 15 | 92 | 4 | 1 | 171 | 5625091 | 5624921 | Sorangium cellulosum 'So ce 56' complete genome | blastn | 868 | 211 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 11235375 | 11235375 | PRJNA1137393_P_NODE_11129_length_249_cov_1.800000_g10613_i0 | PRJNA1137393 | 11129 | 249 | 1.8 | 4.482 | Bacteria | 2 | Bacteria | Bacteria | 279 | 9.5e-71 | NTclustered | gi|1338588479|gb|CP012673.1| | 56 | g10613 | i0 | 87.2 | 121.55421686747 | 250 | 26 | 99 | 6 | 2 | 249 | 3449944 | 3449699 | Sorangium cellulosum strain So ce26 chromosome, complete genome | blastn | 30267 | 279 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 12510754 | 12510754 | PRJNA1137393_P_NODE_11770_length_243_cov_1.582474_g11254_i0 | PRJNA1137393 | 11770 | 243 | 1.582474 | 3.84541182 | Sorangium | 39643 | Bacteria | Bacteria | 278 | 3.3200000000000004e-70 | NTclustered | gi|1566478966|gb|CP012672.1| | 56 | g11254 | i0 | 87.243 | 295.942386831276 | 243 | 31 | 100 | 0 | 1 | 243 | 4330506 | 4330748 | Sorangium cellulosum strain So ce836 chromosome, complete genome | blastn | 71914 | 278 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 14313645 | 14313645 | PRJNA1137393_P_NODE_33672_length_176_cov_1.488189_g33156_i0 | PRJNA1137393 | 33672 | 176 | 1.488189 | 2.61921264 | Melittangium boletus | 83453 | Bacteria | Bacteria | 106 | 1.12e-18 | NTclustered | gi|1243026503|gb|CP022163.1| | 1294270 | g33156 | i0 | 96.825 | 9.64204545454546 | 63 | 2 | 36 | 0 | 56 | 118 | 4717511 | 4717449 | Melittangium boletus DSM 14713 chromosome, complete genome | blastn | 1697 | 106 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Melittangium | Melittangium boletus | ||
| 14313770 | 14313770 | PRJNA1137393_P_NODE_70352_length_162_cov_0.920354_g69836_i0 | PRJNA1137393 | 70352 | 162 | 0.920354 | 1.49097348 | Stigmatella aurantiaca | 41 | Bacteria | Bacteria | 76.8 | 8e-10 | NTclustered | gi|309390350|gb|CP002271.1| | 378806 | g69836 | i0 | 80.198 | 0.623456790123457 | 101 | 20 | 62 | 0 | 9 | 109 | 2857927 | 2858027 | Stigmatella aurantiaca DW4/3-1, complete genome | blastn | 101 | 76.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 15059724 | 15059724 | PRJNA1137393_P_NODE_21932_length_196_cov_1.891156_g21416_i0 | PRJNA1137393 | 21932 | 196 | 1.891156 | 3.70666576 | Myxococcales | 29 | Bacteria | Bacteria | 228 | 2.619999999999999e-55 | NTclustered | gi|2869653495|gb|CP175551.1| | 33 | g21416 | i0 | 91.515 | 219.280612244898 | 165 | 14 | 84 | 0 | 2 | 166 | 3844 | 3680 | Myxococcus fulvus strain KYC1117 chromosome, complete genome | blastn | 42979 | 230 | 0.991304347826087 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus fulvus | ||
| 15059802 | 15059802 | PRJNA1137393_P_NODE_6652_length_330_cov_7.651246_g6136_i0 | PRJNA1137393 | 6652 | 330 | 7.651246 | 25.2491118 | Archangium | 47 | Bacteria | Bacteria | 555 | 1.9399999999999994e-153 | NTclustered | gi|2579687829|gb|CP043494.1| | 83450 | g6136 | i0 | 96.97 | 298.036363636364 | 330 | 10 | 100 | 0 | 1 | 330 | 5101198 | 5100869 | Archangium minus strain Cbm 6 chromosome, complete genome | blastn | 98352 | 555 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium minus | ||
| 15059805 | 15059805 | PRJNA1137393_P_NODE_6752_length_327_cov_16.985612_g6236_i0 | PRJNA1137393 | 6752 | 327 | 16.985612 | 55.54295124 | Sorangium | 39643 | Bacteria | Bacteria | 448 | 3.359999999999999e-121 | NTclustered | gi|1566478966|gb|CP012672.1| | 56 | g6236 | i0 | 91.411 | 272.544342507645 | 326 | 28 | 99 | 0 | 2 | 327 | 3692394 | 3692069 | Sorangium cellulosum strain So ce836 chromosome, complete genome | blastn | 89122 | 448 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 16861756 | 16861756 | PRJNA1137393_P_NODE_13494_length_230_cov_2.596685_g12978_i0 | PRJNA1137393 | 13494 | 230 | 2.596685 | 5.9723755 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 183 | 6.979999999999997e-42 | NTclustered | gi|1958031866|gb|CP064976.1| | 2026735 | g12978 | i0 | 81.659 | 104.530434782609 | 229 | 34 | 99 | 4 | 3 | 230 | 2385083 | 2384862 | MAG: Deltaproteobacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.279_cln chromosome, complete genome | blastn | 24042 | 183 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 16861765 | 16861765 | PRJNA1137393_P_NODE_15874_length_218_cov_1.230769_g15358_i0 | PRJNA1137393 | 15874 | 218 | 1.230769 | 2.68307642 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 143 | 1.11e-29 | NTclustered | gi|2258824976|gb|CP060221.1| | 2026763 | g15358 | i0 | 78.924 | 76.3394495412844 | 223 | 37 | 100 | 10 | 1 | 218 | 1312731 | 1312514 | MAG: Myxococcales bacterium isolate HK-STAS-MYXO-35 chromosome, complete genome | blastn | 16642 | 143 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 16861774 | 16861774 | PRJNA1137393_P_NODE_1914_length_716_cov_2.404798_g1462_i0 | PRJNA1137393 | 1914 | 716 | 2.404798 | 17.21835368 | Vulgatibacter incomptus | 1391653 | Bacteria | Bacteria | 558 | 3.46e-154 | NTclustered | gi|913607065|gb|CP012332.1| | 1391653 | g1462 | i0 | 81.25 | 236.826815642458 | 720 | 110 | 99 | 22 | 3 | 708 | 179256 | 178548 | Vulgatibacter incomptus strain DSM 27710, complete genome | blastn | 169568 | 558 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Vulgatibacteraceae | Vulgatibacter | Vulgatibacter incomptus | ||
| 18136389 | 18136389 | PRJNA1137393_P_NODE_2295_length_643_cov_18.383838_g1816_i0 | PRJNA1137393 | 2295 | 643 | 18.383838 | 118.20807834 | Nannocystis punicea | 2995304 | Bacteria | Bacteria | 841 | 0 | NTclustered | gi|2415023655|gb|CP114040.1| | 2995304 | g1816 | i0 | 90.498 | 145.830482115086 | 642 | 53 | 99 | 4 | 2 | 641 | 7595821 | 7595186 | Nannocystis poenicansa strain FL3 chromosome, complete genome | blastn | 93769 | 841 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis punicea | |||
| 18136433 | 18136433 | PRJNA1137393_P_NODE_37835_length_171_cov_0.926230_g37319_i0 | PRJNA1137393 | 37835 | 171 | 0.92623 | 1.5838533 | Minicystis rosea | 888845 | Bacteria | Bacteria | 202 | 1.34e-47 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g37319 | i0 | 87.931 | 32.7777777777778 | 174 | 17 | 100 | 4 | 1 | 171 | 768848 | 769020 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 5605 | 202 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 18136561 | 18136561 | PRJNA1137393_P_NODE_6755_length_327_cov_10.496403_g6239_i0 | PRJNA1137393 | 6755 | 327 | 10.496403 | 34.32323781 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 429 | 1.2199999999999999e-115 | NTclustered | gi|1338588479|gb|CP012673.1| | 56 | g6239 | i0 | 90.303 | 291.207951070336 | 330 | 28 | 100 | 4 | 1 | 327 | 3451863 | 3451535 | Sorangium cellulosum strain So ce26 chromosome, complete genome | blastn | 95225 | 429 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 20158494 | 20158494 | PRJNA1137393_P_NODE_276_length_1782_cov_274.842470_g165_i0 | PRJNA1137393 | 276 | 1782 | 274.84247 | 4897.6928154 | Sorangium | 39643 | Bacteria | Bacteria | 2041 | 0 | NTclustered | gi|507148211|ref|NR_103018.1| | 56 | g165 | i0 | 87.388 | 136.221099887767 | 1792 | 208 | 100 | 17 | 1 | 1782 | 1 | 1784 | Sorangium cellulosum strain So ce 56 23S ribosomal RNA gene, complete sequence | blastn | 242746 | 2041 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 20158570 | 20158570 | PRJNA1137393_P_NODE_7856_length_298_cov_4.875502_g7340_i0 | PRJNA1137393 | 7856 | 298 | 4.875502 | 14.52899596 | Archangium | 47 | Bacteria | Bacteria | 377 | 4.02e-100 | NTclustered | gi|2579687829|gb|CP043494.1| | 83450 | g7340 | i0 | 89.597 | 256.063758389262 | 298 | 30 | 100 | 1 | 1 | 298 | 5100355 | 5100059 | Archangium minus strain Cbm 6 chromosome, complete genome | blastn | 76307 | 377 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium minus | ||
| 20686247 | 20686247 | PRJNA1137393_P_NODE_64557_length_164_cov_0.860870_g64041_i0 | PRJNA1137393 | 64557 | 164 | 0.86087 | 1.4118268 | Anaeromyxobacter oryzae | 2918170 | Bacteria | Bacteria | 152 | 1.31e-32 | NTclustered | gi|2199265233|dbj|AP025591.1| | 2918170 | g64041 | i0 | 84.868 | 83.4207317073171 | 152 | 22 | 92 | 1 | 8 | 158 | 546776 | 546625 | Anaeromyxobacter oryzae DNA, complete genome | blastn | 13681 | 152 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter oryzae | ||
| 21434042 | 21434042 | PRJNA1137393_P_NODE_7817_length_299_cov_2.876000_g7301_i0 | PRJNA1137393 | 7817 | 299 | 2.876 | 8.59924 | Stigmatella | 40 | Bacteria | Bacteria | 263 | 1.18e-65 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g7301 | i0 | 82.895 | 140.732441471572 | 304 | 40 | 99 | 7 | 1 | 298 | 1684 | 1387 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 42079 | 263 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 21961613 | 21961613 | PRJNA1137393_P_NODE_6518_length_334_cov_12.922807_g6002_i0 | PRJNA1137393 | 6518 | 334 | 12.922807 | 43.16217538 | Nannocystis punicea | 2995304 | Bacteria | Bacteria | 62.1 | 5.23e-5 | NTclustered | gi|2415023655|gb|CP114040.1| | 2995304 | g6002 | i0 | 100 | 0.62874251497006 | 33 | 0 | 10 | 0 | 302 | 334 | 12689874 | 12689842 | Nannocystis poenicansa strain FL3 chromosome, complete genome | blastn | 210 | 62.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis punicea | |||
| 23237082 | 23237082 | PRJNA1137393_P_NODE_5459_length_374_cov_1.113846_g4943_i0 | PRJNA1137393 | 5459 | 374 | 1.113846 | 4.16578404 | Anaeromyxobacter oryzae | 2918170 | Bacteria | Bacteria | 647 | 0 | NTclustered | gi|2199265233|dbj|AP025591.1| | 2918170 | g4943 | i0 | 97.861 | 632.593582887701 | 374 | 8 | 100 | 0 | 1 | 374 | 947203 | 947576 | Anaeromyxobacter oryzae DNA, complete genome | blastn | 236590 | 647 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter oryzae | ||
| 23984356 | 23984356 | PRJNA1137393_P_NODE_1819_length_736_cov_10.429403_g1374_i0 | PRJNA1137393 | 1819 | 736 | 10.429403 | 76.76040608 | Stigmatella | 40 | Bacteria | Bacteria | 784 | 0 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g1374 | i0 | 86.062 | 238.858695652174 | 739 | 92 | 99 | 11 | 3 | 736 | 1106 | 1838 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 175800 | 784 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 24510614 | 24510614 | PRJNA1137393_P_NODE_19960_length_202_cov_1.385621_g19444_i0 | PRJNA1137393 | 19960 | 202 | 1.385621 | 2.79895442 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 195 | 2.76e-45 | NTclustered | gi|2258824976|gb|CP060221.1| | 2026763 | g19444 | i0 | 84.158 | 463.450495049505 | 202 | 31 | 100 | 1 | 1 | 202 | 1312106 | 1311906 | MAG: Myxococcales bacterium isolate HK-STAS-MYXO-35 chromosome, complete genome | blastn | 93617 | 195 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;