RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1137393" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1137393 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5387923 5387923 PRJNA1137393_P_NODE_37545_length_171_cov_1.344262_g37029_i0 PRJNA1137393 37545 171 1.344262 2.29868802 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 255 1.02e-63   NTclustered gi|837350690|gb|CP011211.1| 1619070 g37029 i0 93.567 5.62573099415205 171 11 100 0 1 171 849915 850085 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 962 255 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
5388013 5388013 PRJNA1137393_P_NODE_60705_length_164_cov_1.504348_g60189_i0 PRJNA1137393 60705 164 1.504348 2.46713072 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 270 3.4699999999999992e-68   NTclustered gi|1958123529|gb|CP065016.1| 2026720 g60189 i0 96.341 37.859756097561 164 6 100 0 1 164 636081 636244 Candidatus Saccharibacteria bacterium isolate Vibo_18-Q3-R45-57_BAT3C.117_fly chromosome, complete genome blastn 6209 270 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
6134925 6134925 PRJNA1137393_P_NODE_38705_length_170_cov_0.809917_g38189_i0 PRJNA1137393 38705 170 0.809917 1.3768589 Candidatus Saccharimonas 1331051 Bacteria Bacteria 259 7.8e-65   NTclustered gi|499052612|gb|CP005957.1| 1332188 g38189 i0 95.679 61.6764705882353 162 6 95 1 1 161 694875 694714 Candidatus Saccharimonas aalborgensis isolate TM71 chromosome, complete genome blastn 10485 259 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas aalborgensis
8685114 8685114 PRJNA1137393_P_NODE_12367_length_238_cov_3.079365_g11851_i0 PRJNA1137393 12367 238 3.079365 7.3288887 Bacteria 2 Bacteria Bacteria 401 1.8399999999999994e-107   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g11851 i0 97.083 283.457983193277 240 3 100 3 1 238 800134 800371 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 67463 401 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
14313631 14313631 PRJNA1137393_P_NODE_28732_length_183_cov_2.373134_g28216_i0 PRJNA1137393 28732 183 2.373134 4.34283522 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 270 3.949999999999999e-68   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g28216 i0 93.443 60.4590163934426 183 10 99 2 2 183 799953 800134 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 11064 270 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
22708900 22708900 PRJNA1137393_P_NODE_12658_length_236_cov_1.358289_g12142_i0 PRJNA1137393 12658 236 1.358289 3.20556204 Bacteria 2 Bacteria Bacteria 387 5.11e-103   NTclustered gi|837350690|gb|CP011211.1| 1619070 g12142 i0 96.186 187.525423728814 236 9 100 0 1 236 850590 850825 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 44256 387 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
23237004 23237004 PRJNA1137393_P_NODE_34159_length_175_cov_1.706349_g33643_i0 PRJNA1137393 34159 175 1.706349 2.98611075 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 313 6.13e-81   NTclustered gi|2874254031|emb|OY970356.1| 179883 g33643 i0 99.419 272.811428571429 172 1 98 0 4 175 599004 598833 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD05684.bin.c.4 genome assembly, chromosome: 1 blastn 47742 313 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;