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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1137393" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 9 ✖

bioproject 1

  • PRJNA1137393 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1559393 1559393 PRJNA1137393_P_NODE_6102_length_348_cov_3.040134_g5586_i0 PRJNA1137393 6102 348 3.040134 10.57966632 Sopatrul virus 3131609 Viruses Viruses 350 1.04e-91   NTclustered gi|2717322931|gb|PP173910.1| 3131609 g5586 i0 86.462 53.7873563218391 325 37 92 5 29 348 687 365 MAG: Sopatrul virus isolate SP1A_k141_123728 genomic sequence blastn 18718 350 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Sopatrul virus
7937705 7937705 PRJNA1137393_P_NODE_21547_length_197_cov_2.290541_g21031_i0 PRJNA1137393 21547 197 2.290541 4.51236577 Ripagron virus 3130596 Viruses Viruses 119 1.66e-22   NTclustered gi|2717320202|gb|PP172898.1| 3130596 g21031 i0 80.503 2.34010152284264 159 27 80 4 26 182 238 394 MAG: Ripagron virus isolate KCAP2_k141_176596 genomic sequence blastn 461 119 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Ripagron virus
14313774 14313774 PRJNA1137393_P_NODE_70812_length_162_cov_0.920354_g70296_i0 PRJNA1137393 70812 162 0.920354 1.49097348 Tobamovirus capsici 3432865 Viruses Viruses 300 4.36e-77   NTclustered gi|20177424|ref|NC_003630.1| 12239 g70296 i0 100 99.9567901234568 162 0 100 0 1 162 5744 5583 Pepper mild mottle virus, complete genome blastn 16193 300 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus capsici
18136376 18136376 PRJNA1137393_P_NODE_18315_length_208_cov_1.238994_g17799_i0 PRJNA1137393 18315 208 1.238994 2.57710752 Moss associated botourmia-like virus 63 3066699 Viruses Viruses 176 1.04e-39   NTclustered gi|2626076699|gb|OQ987193.1| 3066699 g17799 i0 84.699 1.34134615384615 183 20 86 8 10 188 972 1150 MAG: Moss associated botourmia-like virus 63 isolate DICBIL genomic sequence blastn 279 176 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Moss associated botourmia-like virus 63
21961436 21961436 PRJNA1137393_P_NODE_22758_length_194_cov_1.434483_g22242_i0 PRJNA1137393 22758 194 1.434483 2.78289702 Potexvirus flavitrifolii 3433843 Viruses Viruses 331 1.92e-86   NTclustered gi|2217161454|gb|OL584354.1| 12177 g22242 i0 97.423 10 194 5 100 0 1 194 698 505 Clover yellow mosaic virus isolate DSMZ PV-0851 genomic sequence blastn 1940 331 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus flavitrifolii
21961661 21961661 PRJNA1137393_P_NODE_8998_length_277_cov_1.192982_g8482_i0 PRJNA1137393 8998 277 1.192982 3.30456014 Chemarfal virus 262 3063354 Viruses Viruses 490 4.56e-134   NTclustered gi|2626080003|gb|OR270572.1| 3063354 g8482 i0 98.556 2 277 4 100 0 1 277 760 1036 MAG: Chemarfal virus 262 isolate ML188 genomic sequence blastn 554 490 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Chemarfal virus 262
23236945 23236945 PRJNA1137393_P_NODE_12359_length_238_cov_3.994709_g11843_i0 PRJNA1137393 12359 238 3.994709 9.50740742 Chrocaryrb virus 3129548 Viruses Viruses 257 4.22e-64   NTclustered gi|2717317854|gb|PP171996.1| 3129548 g11843 i0 86.42 205.012605042017 243 24 100 6 1 238 1305 1543 MAG: Chrocaryrb virus isolate CC1C_k141_106130 genomic sequence blastn 48793 257 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocaryrb virus
24510656 24510656 PRJNA1137393_P_NODE_37580_length_171_cov_1.295082_g37064_i0 PRJNA1137393 37580 171 1.295082 2.21459022 Betacoronavirus pandemicum 3418604 Viruses Viruses 316 4.6e-82   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g37064 i0 100 100 171 0 100 0 1 171 13946 13776 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 17100 316 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
24510691 24510691 PRJNA1137393_P_NODE_48060_length_167_cov_0.881356_g47544_i0 PRJNA1137393 48060 167 0.881356 1.47186452 Sopapen virus 3131614 Viruses Viruses 71.3 3.87e-8   NTclustered gi|2717322942|gb|PP173915.1| 3131614 g47544 i0 88.136 1.61077844311377 59 7 35 0 109 167 527 469 MAG: Sopapen virus isolate SP1A_k141_131186 genomic sequence blastn 269 71.3 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sopapen virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;