contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA1137393" and tax_clade = "delta/epsilon subdivisions"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 284820 | 284820 | PRJNA1137393_P_NODE_6901_length_323_cov_3.142336_g6385_i0 | PRJNA1137393 | 6901 | 323 | 3.142336 | 10.14974528 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 346 | 1.24e-90 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g6385 | i0 | 86.111 | 114.941176470588 | 324 | 42 | 100 | 3 | 1 | 323 | 12654 | 12333 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 37126 | 346 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 2307363 | 2307363 | PRJNA1137393_P_NODE_21502_length_197_cov_24.729730_g20986_i0 | PRJNA1137393 | 21502 | 197 | 24.72973 | 48.7175681 | Pseudomonadota | 1224 | Bacteria | Bacteria | 363 | 6.939999999999998e-96 | NTclustered | gi|396083920|gb|JX114435.1| | 34034 | g20986 | i0 | 100 | 98.746192893401 | 196 | 0 | 99 | 0 | 2 | 197 | 531 | 336 | Uncultured delta proteobacterium clone SNNP_2012-102 16S ribosomal RNA gene, partial sequence | blastn | 19453 | 363 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 2835492 | 2835492 | PRJNA1137393_P_NODE_6103_length_348_cov_3.026756_g5587_i0 | PRJNA1137393 | 6103 | 348 | 3.026756 | 10.53311088 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 337 | 8.13e-88 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g5587 | i0 | 84.659 | 109.801724137931 | 352 | 39 | 99 | 10 | 5 | 348 | 13641 | 13985 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 38211 | 337 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 6134924 | 6134924 | PRJNA1137393_P_NODE_38285_length_170_cov_1.446281_g37769_i0 | PRJNA1137393 | 38285 | 170 | 1.446281 | 2.4586777 | Bacteria | 2 | Bacteria | Bacteria | 303 | 3.55e-78 | NTclustered | gi|219962810|gb|FJ570350.1| | 34034 | g37769 | i0 | 98.824 | 100.035294117647 | 170 | 2 | 100 | 0 | 1 | 170 | 336 | 505 | Uncultured delta proteobacterium clone A6YG18RM small subunit ribosomal RNA gene, partial sequence | blastn | 17006 | 303 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 6134940 | 6134940 | PRJNA1137393_P_NODE_4625_length_415_cov_11.183060_g4110_i0 | PRJNA1137393 | 4625 | 415 | 11.18306 | 46.409699 | Nannocystis | 53 | Bacteria | Bacteria | 619 | 8.719999999999999e-173 | NTclustered | gi|430803017|gb|KC011126.1| | 34034 | g4110 | i0 | 93.932 | 98.5638554216868 | 412 | 21 | 99 | 4 | 6 | 415 | 740 | 331 | Uncultured delta proteobacterium clone bsc27 16S ribosomal RNA gene, partial sequence | blastn | 40904 | 625 | 0.9904 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 11763418 | 11763418 | PRJNA1137393_P_NODE_5250_length_383_cov_3.739521_g4734_i0 | PRJNA1137393 | 5250 | 383 | 3.739521 | 14.32236543 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 466 | 1.0999999999999999e-126 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g4734 | i0 | 88.773 | 178.707571801567 | 383 | 40 | 99 | 3 | 2 | 383 | 13654 | 13274 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 68445 | 466 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 14313576 | 14313576 | PRJNA1137393_P_NODE_10572_length_255_cov_3.048544_g10056_i0 | PRJNA1137393 | 10572 | 255 | 3.048544 | 7.7737872 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 394 | 3.34e-105 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g10056 | i0 | 94.51 | 139.254901960784 | 255 | 14 | 100 | 0 | 1 | 255 | 12911 | 13165 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 35510 | 394 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 14313654 | 14313654 | PRJNA1137393_P_NODE_3692_length_482_cov_2.475751_g3180_i0 | PRJNA1137393 | 3692 | 482 | 2.475751 | 11.93311982 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 555 | 2.939999999999999e-153 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g3180 | i0 | 87.526 | 122.593360995851 | 481 | 59 | 99 | 1 | 3 | 482 | 13754 | 13274 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 59090 | 555 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 20158458 | 20158458 | PRJNA1137393_P_NODE_11016_length_250_cov_2.820896_g10500_i0 | PRJNA1137393 | 11016 | 250 | 2.820896 | 7.05224 | Bacteria | 2 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|927353730|gb|KT322264.1| | 34034 | g10500 | i0 | 100 | 99.448 | 250 | 0 | 100 | 0 | 1 | 250 | 253 | 4 | Uncultured delta proteobacterium clone TGR_WLFZ-84 16S ribosomal RNA gene, partial sequence | blastn | 24862 | 462 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;