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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA1136957" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 16 ✖

bioproject 1

  • PRJNA1136957 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
284576 284576 PRJNA1136957_S_NODE_16141_length_217_cov_1.158228_g16044_i0 PRJNA1136957 16141 217 1.158228 2.51335476 Caudoviricetes sp. 2832643 Viruses Viruses 93.5 1.13e-14   NTclustered gi|2059642312|tpg|BK028639.1| 2832643 g16044 i0 100 0.230414746543779 50 0 23 0 1 50 36832 36881 MAG TPA_asm: Caudoviricetes sp. isolate ctcSv2, partial genome blastn 50 93.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
1559171 1559171 PRJNA1136957_S_NODE_16702_length_213_cov_1.850649_g16605_i0 PRJNA1136957 16702 213 1.850649 3.94188237 Moovirus moo 3060392 Viruses Viruses 344 2.76e-90   NTclustered gi|2438080420|ref|NC_070850.1| 2886042 g16605 i0 95.775 9.22065727699531 213 9 100 0 1 213 18536 18324 Shigella virus Moo19, complete genome blastn 1964 344 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Schitoviridae Moovirus Moovirus moo
2307313 2307313 PRJNA1136957_S_NODE_11282_length_255_cov_1.091837_g11185_i0 PRJNA1136957 11282 255 1.091837 2.78418435 Gammaretrovirus 153135 Viruses Viruses 377 3.37e-100   NTclustered gi|509019|gb|M59898.1|MCFENVBE 11785 g11185 i0 96.491 123.019607843137 228 8 89 0 1 228 477 250 Mink cell focus-forming virus proviral long terminal repeat, clone TE3/3 blastn 31370 377 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
2835270 2835270 PRJNA1136957_S_NODE_3423_length_403_cov_8.293605_g3326_i0 PRJNA1136957 3423 403 8.293605 33.42322815 Potexvirus pepini 3433856 Viruses Viruses 728 0   NTclustered gi|1674914793|gb|MK391570.1| 112229 g3326 i0 99.5 95.3126550868486 400 2 99 0 1 400 6016 6415 Pepino mosaic virus isolate PMV/DIA131, complete genome blastn 38411 728 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
4860079 4860079 PRJNA1136957_S_NODE_20904_length_193_cov_0.910448_g20807_i0 PRJNA1136957 20904 193 0.910448 1.75716464 Pandoravirus 2060084 Viruses Viruses 52.8 0.017   NTclustered gi|751661011|gb|KP136319.1| 1605721 g20807 i0 100 0.435233160621762 28 0 15 0 165 192 1403389 1403362 Pandoravirus inopinatum isolate KlaHel, complete genome blastn 84 52.8 1 Viruses             Pandoravirus Pandoravirus inopinatum
5387753 5387753 PRJNA1136957_S_NODE_12205_length_246_cov_1.957219_g12108_i0 PRJNA1136957 12205 246 1.957219 4.81475874 Potexvirus pepini 3433856 Viruses Viruses 455 1.4500000000000002e-123   NTclustered gi|336288971|gb|HQ663890.1| 112229 g12108 i0 100 57.9918699186992 246 0 100 0 1 246 1699 1454 Pepino mosaic virus isolate SAR09, complete genome blastn 14266 455 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
6662409 6662409 PRJNA1136957_S_NODE_15026_length_224_cov_1.472727_g14929_i0 PRJNA1136957 15026 224 1.472727 3.29890848 Caudoviricetes sp. 2832643 Viruses Viruses 161 3.1699999999999996e-35   NTclustered gi|2059642312|tpg|BK028639.1| 2832643 g14929 i0 90.909 0.540178571428571 121 9 54 2 100 219 16879 16998 MAG TPA_asm: Caudoviricetes sp. isolate ctcSv2, partial genome blastn 121 161 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
6662457 6662457 PRJNA1136957_S_NODE_3666_length_395_cov_2.261905_g3569_i0 PRJNA1136957 3666 395 2.261905 8.93452475 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.003   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g3569 i0 100 0.146835443037975 30 0 8 0 1 30 6 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
10488142 10488142 PRJNA1136957_S_NODE_19329_length_199_cov_0.871429_g19232_i0 PRJNA1136957 19329 199 0.871429 1.73414371 Red mite associated cystovirus 2936548 Viruses Viruses 237 4.44e-58   NTclustered gi|2239998150|gb|ON160022.1| 2936548 g19232 i0 92.683 0.824120603015075 164 12 82 0 35 198 841 1004 Red mite associated cystovirus isolate RMACTV1-L P14, P15, P7, P2, P4, and P1 genes, complete cds blastn 164 237 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
11235365 11235365 PRJNA1136957_S_NODE_4589_length_366_cov_1.397394_g4492_i0 PRJNA1136957 4589 366 1.397394 5.11446204 Potexvirus 12176 Viruses Viruses 676 0   NTclustered gi|957761914|gb|KT253432.1| 112229 g4492 i0 100 90.3579234972678 366 0 100 0 1 366 529 164 Pepino mosaic virus isolate MA10 RNA-dependent RNA polymerase (RdRp) gene, partial cds blastn 33071 676 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
15587465 15587465 PRJNA1136957_S_NODE_16973_length_211_cov_2.427632_g16876_i0 PRJNA1136957 16973 211 2.427632 5.12230352 Lentivirus humimdef1 3418650 Viruses Viruses 52.8 0.019   NTclustered gi|306477570|gb|HM990251.1| 11676 g16876 i0 100 1.06161137440758 28 0 13 0 50 77 2451 2478 HIV-1 isolate pt_12 clone 17 from Italy pol protein (pol) gene, partial cds blastn 224 52.8 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Lentivirus Lentivirus humimdef1
15587467 15587467 PRJNA1136957_S_NODE_17173_length_210_cov_2.019868_g17076_i0 PRJNA1136957 17173 210 2.019868 4.2417228 Pseudomonas phage ER16 2917704 Viruses Viruses 193 1.04e-44   NTclustered gi|2209092829|gb|OM650250.1| 2917704 g17076 i0 83.333 1 210 34 100 1 1 210 967 1175 Pseudomonas phage ER16 segment S, complete sequence blastn 210 193 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Pseudomonas phage ER16
16861666 16861666 PRJNA1136957_S_NODE_12974_length_239_cov_2.605556_g12877_i0 PRJNA1136957 12974 239 2.605556 6.22727884 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.006   NTclustered gi|2309594316|gb|OP536747.1| 10244 g12877 i0 100 12.1338912133891 29 0 12 0 137 165 119274 119302 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
18136307 18136307 PRJNA1136957_S_NODE_19895_length_197_cov_0.855072_g19798_i0 PRJNA1136957 19895 197 0.855072 1.68449184 Moovirus moo 3060392 Viruses Viruses 353 4.18e-93   NTclustered gi|2438080420|ref|NC_070850.1| 2886042 g19798 i0 98.985 29.5583756345178 197 2 100 0 1 197 58212 58408 Shigella virus Moo19, complete genome blastn 5823 353 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Schitoviridae Moovirus Moovirus moo
20686024 20686024 PRJNA1136957_S_NODE_4857_length_358_cov_1.254181_g4760_i0 PRJNA1136957 4857 358 1.254181 4.48996798 Varicellovirus cervidalpha2 3050260 Viruses Viruses 63.9 1.57e-5   NTclustered gi|2500372361|ref|NC_075563.1| 365327 g4760 i0 84.615 1.09497206703911 65 8 18 2 251 314 94531 94594 Cervid alphaherpesvirus 2 strain Norway, complete genome blastn 392 63.9 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Varicellovirus Varicellovirus cervidalpha2
20686046 20686046 PRJNA1136957_S_NODE_9237_length_279_cov_1.109091_g9140_i0 PRJNA1136957 9237 279 1.109091 3.09436389 Pijolavirus UFJFPfSW6 3431677 Viruses Viruses 488 1.6499999999999999e-133   NTclustered gi|2416396763|gb|OP924544.1| 3003725 g9140 i0 98.208 3.86021505376344 279 5 100 0 1 279 36140 36418 Pseudomonas phage UFJF_PfSW6, complete genome blastn 1077 488 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales Autotranscriptaviridae Pijolavirus Pijolavirus UFJFPfSW6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;