RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1136505" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1136505 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2835131 2835131 PRJNA1136505_P_NODE_114643_length_269_cov_1.780612_g107783_i0 PRJNA1136505 114643 269 1.780612 4.78984628 Dreissena polymorpha 45954 Mollusca Mollusca 58.4 5.3e-4   NTclustered gi|2364452045|ref|XM_052424887.1| 45954 g107783 i0 89.362 0.382899628252788 47 4 17 1 78 124 915 960 PREDICTED: Dreissena polymorpha proteoglycan 4-like (LOC127878358), mRNA blastn 103 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
11763146 11763146 PRJNA1136505_P_NODE_46210_length_471_cov_1.806533_g39351_i0 PRJNA1136505 46210 471 1.806533 8.50877043 Ylistrum balloti 509963 Mollusca Mollusca 222 3.2999999999999996e-53   NTclustered gi|2592072849|ref|XM_060216384.1| 509963 g39351 i0 78.212 28.6093418259023 358 71 76 7 52 407 58 410 PREDICTED: Ylistrum balloti large ribosomal subunit protein uL15-like (LOC132552236), transcript variant X1, mRNA blastn 13475 222 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;