RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1136505" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1136505 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3582482 3582482 PRJNA1136505_P_NODE_134543_length_249_cov_1.414773_g127683_i0 PRJNA1136505 134543 249 1.414773 3.52278477 Metazoa 33208 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g127683 i0 100 1.08032128514056 30 0 12 0 90 119 455653 455682 Anemonia sulcata genome assembly, chromosome: 9 blastn 269 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
14313383 14313383 PRJNA1136505_P_NODE_114872_length_269_cov_1.413265_g108012_i0 PRJNA1136505 114872 269 1.413265 3.80168285 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 315 2.85e-81   NTclustered gi|1778066600|ref|XM_031714937.1| 6105 g108012 i0 88.015 86.8029739776952 267 30 99 2 4 269 1361 1096 PREDICTED: Actinia tenebrosa ATP synthase subunit beta, mitochondrial (LOC116305101), mRNA blastn 23350 315 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
14313396 14313396 PRJNA1136505_P_NODE_125792_length_256_cov_1.065574_g118932_i0 PRJNA1136505 125792 256 1.065574 2.72786944 Eunicella cavolini 317547 Cnidaria other_Eukaryota 60.2 1.39e-4   NTclustered gi|2918369554|emb|OZ237726.1| 317547 g118932 i0 88 0.9765625 50 6 20 0 9 58 4572902 4572853 Eunicella cavolini genome assembly, chromosome: 10 blastn 250 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
15587345 15587345 PRJNA1136505_P_NODE_121133_length_261_cov_2.026596_g114273_i0 PRJNA1136505 121133 261 2.026596 5.28941556 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 58.4 5.12e-4   NTclustered gi|1778046829|ref|XM_031705230.1| 6105 g114273 i0 100 0.440613026819923 31 0 12 0 10 40 1160 1190 PREDICTED: Actinia tenebrosa KH homology domain-containing protein 4-like (LOC116297081), mRNA blastn 115 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;