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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1136505" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1136505 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15059673 15059673 PRJNA1136505_P_NODE_154112_length_241_cov_1.488095_g147252_i0 PRJNA1136505 154112 241 1.488095 3.58630895 root 1 Root_unresolved Root_unresolved 58.4 4.66e-4   NTclustered gi|2918369620|emb|OZ237782.1| 311461 g147252 i0 90.698 2.45228215767635 43 4 18 0 141 183 9019468 9019426 Hirudo verbana genome assembly, chromosome: 4 blastn 591 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
18136223 18136223 PRJNA1136505_P_NODE_155755_length_241_cov_0.916667_g148895_i0 PRJNA1136505 155755 241 0.916667 2.20916747 Helobdella robusta 6412 Annelida Annelida 54.7 0.006   NTclustered gi|675871503|ref|XM_009023064.1| 6412 g148895 i0 100 0.120331950207469 29 0 12 0 209 237 1969 1941 Helobdella robusta hypothetical protein mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
25258300 25258300 PRJNA1136505_P_NODE_46880_length_465_cov_3.494898_g40021_i0 PRJNA1136505 46880 465 3.494898 16.2512757 Metazoa 33208 Annelida Annelida 102 4.42e-17   NTclustered gi|2444161504|gb|OQ076767.1| 1348078 g40021 i0 78.75 25.2924731182796 160 28 34 5 1 157 3282 3126 Hirudinaria manillensis voucher CSU-MG-8 mitochondrion, partial genome blastn 11761 102 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudinaria Hirudinaria manillensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;