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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA1136505" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 10 ✖

bioproject 1

  • PRJNA1136505 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5387726 5387726 PRJNA1136505_P_NODE_48205_length_456_cov_1.516971_g41346_i0 PRJNA1136505 48205 456 1.516971 6.91738776 Chlamydomonas reinhardtii 3055 Plants Plants 257 8.730000000000001e-64   NTclustered gi|2082236323|ref|XM_001689445.2| 3055 g41346 i0 78.089 5.50657894736842 429 78 92 12 9 426 325 748 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g019250v5), mRNA blastn 2511 257 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
6662301 6662301 PRJNA1136505_P_NODE_119866_length_263_cov_1.368421_g113006_i0 PRJNA1136505 119866 263 1.368421 3.59894723 Chlorella variabilis 554065 Plants Plants 148 2.9799999999999997e-31   NTclustered gi|552833685|ref|XM_005848518.1| 554065 g113006 i0 86.131 0.520912547528517 137 19 52 0 1 137 141 5 Chlorella variabilis hypothetical protein (CHLNCDRAFT_15825) mRNA, partial cds blastn 137 148 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
6662361 6662361 PRJNA1136505_P_NODE_49926_length_444_cov_1.490566_g43067_i0 PRJNA1136505 49926 444 1.490566 6.61811304 Scenedesmus acutus 104103 Plants Plants 224 8.6e-54   NTclustered gi|1943322736|gb|MT611452.1| 104103 g43067 i0 85.135 5.49099099099099 222 30 50 1 1 222 498 716 Scenedesmus acutus guanine nucleotide-binding protein subunit beta-like protein mRNA, partial cds blastn 2438 224 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus acutus
9212519 9212519 PRJNA1136505_P_NODE_37928_length_558_cov_2.169072_g31096_i0 PRJNA1136505 37928 558 2.169072 12.10342176 Chlamydomonas reinhardtii 3055 Plants Plants 174 1.1199999999999999e-38   NTclustered gi|2082265902|ref|XM_043070515.1| 3055 g31096 i0 82.673 4.42293906810036 202 29 36 4 101 299 381 183 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_15g635600v5), mRNA blastn 2468 174 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9212540 9212540 PRJNA1136505_P_NODE_96228_length_294_cov_1.393665_g89368_i0 PRJNA1136505 96228 294 1.393665 4.0973751 Monoraphidium neglectum 145388 Plants Plants 279 1.15e-70   NTclustered gi|926783383|ref|XM_014044712.1| 145388 g89368 i0 84.429 26.6156462585034 289 39 97 4 9 294 557 842 Monoraphidium neglectum 26S proteasome regulatory subunit T1 mRNA blastn 7825 279 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
13038247 13038247 PRJNA1136505_P_NODE_77751_length_332_cov_1.783784_g70891_i0 PRJNA1136505 77751 332 1.783784 5.92216288 Chlamydomonas reinhardtii 3055 Plants Plants 139 2.33e-28   NTclustered gi|2082237132|ref|XM_001689609.2| 3055 g70891 i0 75.081 1.86144578313253 309 71 92 6 1 306 552 857 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g038400v5), mRNA blastn 618 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13785365 13785365 PRJNA1136505_P_NODE_72531_length_345_cov_3.216912_g65671_i0 PRJNA1136505 72531 345 3.216912 11.0983464 Eukaryota 2759 Plants Plants 623 5.519999999999999e-174   NTclustered gi|1898545223|gb|MT951391.1| 3078 g65671 i0 99.417 99.4144927536232 343 2 99 0 3 345 1270 1612 Auxenochlorella pyrenoidosa strain Ozcimen001 small subunit ribosomal RNA gene, partial sequence blastn 34298 623 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
14313463 14313463 PRJNA1136505_P_NODE_68352_length_358_cov_1.508772_g61492_i0 PRJNA1136505 68352 358 1.508772 5.40140376 Chlorella variabilis 554065 Plants Plants 307 6.55e-79   NTclustered gi|552829255|ref|XM_005847597.1| 554065 g61492 i0 85.473 14.9748603351955 296 41 82 2 64 358 28 322 Chlorella variabilis hypothetical protein (CHLNCDRAFT_48816) mRNA, complete cds blastn 5361 307 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
17609658 17609658 PRJNA1136505_P_NODE_73494_length_343_cov_1.211111_g66634_i0 PRJNA1136505 73494 343 1.211111 4.15411073 Chlorophyta 3041 Plants Plants 364 3.6699999999999987e-96   NTclustered gi|926763009|ref|XM_014035103.1| 145388 g66634 i0 90.809 89.1253644314869 272 25 79 0 72 343 308 37 Monoraphidium neglectum Histone H4 mRNA blastn 30570 364 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
24510408 24510408 PRJNA1136505_P_NODE_122280_length_260_cov_1.395722_g115420_i0 PRJNA1136505 122280 260 1.395722 3.6288772 Trebouxia sp. SL0000003 3350044 Plants Plants 126 1.38e-24   NTclustered gi|2917929618|emb|OZ234906.1| 3350044 g115420 i0 80.745 0.619230769230769 161 31 62 0 100 260 3910622 3910782 Trebouxia sp. SL0000003 genome assembly, chromosome: 1 blastn 161 126 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;