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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1136505" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA1136505 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7937560 7937560 PRJNA1136505_P_NODE_59627_length_391_cov_0.861635_g52767_i0 PRJNA1136505 59627 391 0.861635 3.36899285 Thecamonas trahens 529818 Root_unresolved Root_unresolved 265 4.41e-66   NTclustered gi|923126424|ref|XM_013901225.1| 461836 g52767 i0 82.935 80.6649616368287 293 50 75 0 33 325 4663 4955 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_12051), partial mRNA blastn 31540 265 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
18136249 18136249 PRJNA1136505_P_NODE_76155_length_336_cov_1.501901_g69295_i0 PRJNA1136505 76155 336 1.501901 5.04638736 Thecamonas trahens 529818 Root_unresolved Root_unresolved 246 1.35e-60   NTclustered gi|923132712|ref|XM_013904368.1| 461836 g69295 i0 80.422 38.2083333333333 332 57 98 8 2 329 1071 744 Thecamonas trahens ATCC 50062 actin-like protein 3 (AMSG_03466), partial mRNA blastn 12838 246 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
24510427 24510427 PRJNA1136505_P_NODE_134740_length_249_cov_1.278409_g127880_i0 PRJNA1136505 134740 249 1.278409 3.18323841 Thecamonas trahens 529818 Root_unresolved Root_unresolved 89.8 1.72e-13   NTclustered gi|923132072|ref|XM_013904048.1| 461836 g127880 i0 88 0.301204819277108 75 9 30 0 174 248 330 256 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_02595), partial mRNA blastn 75 89.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
24510463 24510463 PRJNA1136505_P_NODE_35660_length_591_cov_1.040541_g28843_i0 PRJNA1136505 35660 591 1.040541 6.14959731 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.005   NTclustered gi|923121597|ref|XM_013898816.1| 461836 g28843 i0 97.059 0.106598984771574 34 0 6 1 119 151 974 1007 Thecamonas trahens ATCC 50062 CCR4-Not complex subunit Caf16 (AMSG_09854), mRNA blastn 63 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;