RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1134759" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 3 ✖

bioproject 1

  • PRJNA1134759 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2834854 2834854 PRJNA1134759_P_NODE_46623_length_257_cov_1.695652_g46447_i0 PRJNA1134759 46623 257 1.695652 4.35782564 Nanohaloarchaea archaeon SG9 1737403 Archaea Archaea 78.7 3.86e-10   NTclustered gi|1078647179|gb|CP012986.1| 1737403 g46447 i0 84.81 0.587548638132296 79 10 30 2 105 181 3585 3507 Nanohaloarchaea archaeon SG9, complete genome blastn 151 78.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Nanohaloarchaea       Nanohaloarchaea archaeon SG9
21960949 21960949 PRJNA1134759_P_NODE_39598_length_274_cov_1.960199_g39422_i0 PRJNA1134759 39598 274 1.960199 5.37094526 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 52.8 0.025   NTclustered gi|2695672541|gb|CP118754.2| 1452353 g39422 i0 100 0.102189781021898 28 0 10 0 98 125 141740 141713 Methanosphaera sp. ISO3-F5 plasmid pNP174, complete sequence blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5
23236513 23236513 PRJNA1134759_P_NODE_50159_length_251_cov_0.876404_g49983_i0 PRJNA1134759 50159 251 0.876404 2.19977404 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 54.7 0.006   NTclustered gi|2108003788|gb|CP070773.1| 2026714 g49983 i0 94.444 0.143426294820717 36 0 14 1 199 234 1120684 1120717 MAG: Candidatus Bathyarchaeota archaeon isolate bin22 chromosome blastn 36 54.7 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;