RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1132896" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1132896 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
283639 283639 PRJNA1132896_P_NODE_5081_length_273_cov_2.280000_g4990_i0 PRJNA1132896 5081 273 2.28 6.2244 Phycomyces blakesleeanus 4837 Fungi Fungi 158 5.16e-34   NTclustered gi|1069948066|ref|XM_018429500.1| 763407 g4990 i0 77.612 8.09157509157509 268 55 97 5 1 264 446 180 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 2209 158 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
5386797 5386797 PRJNA1132896_P_NODE_1305_length_458_cov_1.038961_g1214_i0 PRJNA1132896 1305 458 1.038961 4.75844138 Mycotypha africana 64632 Fungi Fungi 189 3.2499999999999992e-43   NTclustered gi|2432561609|ref|XM_053077210.1| 64632 g1214 i0 80.723 16.3558951965066 249 42 54 6 3 248 148 393 Mycotypha africana 40S ribosomal protein S16 (BDF20DRAFT_816965), partial mRNA blastn 7491 189 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
11762210 11762210 PRJNA1132896_P_NODE_1470_length_435_cov_1.008287_g1379_i0 PRJNA1132896 1470 435 1.008287 4.38604845 Radiomyces spectabilis 64574 Fungi Fungi 398 4.679999999999998e-106   NTclustered gi|2323718658|ref|XM_051562801.1| 64574 g1379 i0 83.527 182.347126436782 431 66 98 5 1 428 283 711 Radiomyces spectabilis ubiquitin-related domain-containing protein (BYT42DRAFT_271756), mRNA blastn 79321 398 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
23235922 23235922 PRJNA1132896_P_NODE_3059_length_320_cov_0.923077_g2968_i0 PRJNA1132896 3059 320 0.923077 2.9538464 Mucor velutinosus 708070 Fungi Fungi 220 7.77e-53   NTclustered gi|2724930861|ref|XM_064822107.1| 708070 g2968 i0 81.852 14.63125 270 41 83 7 2 267 1126 1391 Mucor velutinosus uncharacterized protein (ATC70_002737), partial mRNA blastn 4682 220 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus
23235941 23235941 PRJNA1132896_P_NODE_5099_length_273_cov_1.695000_g5008_i0 PRJNA1132896 5099 273 1.695 4.62735 Mucor mucedo 29922 Fungi Fungi 154 6.68e-33   NTclustered gi|2324046031|ref|XM_051597563.1| 29922 g5008 i0 80.383 3.37362637362637 209 35 75 6 10 215 135 340 Mucor mucedo 60S ribosomal protein L37a (EV154DRAFT_461754), mRNA blastn 921 154 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;