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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1132896" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1132896 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2834259 2834259 PRJNA1132896_P_NODE_1283_length_461_cov_2.649485_g1192_i0 PRJNA1132896 1283 461 2.649485 12.21412585 Badhamia melanospora 1346252 Evosea other_Eukaryota 429 1.7699999999999996e-115   NTclustered gi|2440757457|gb|OP616492.1| 1346252 g1192 i0 83.589 96.9197396963124 457 73 99 2 3 458 469 14 Badhamia melanospora voucher LE266197 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 44680 429 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Badhamia Badhamia melanospora
5386814 5386814 PRJNA1132896_P_NODE_2545_length_345_cov_1.529412_g2454_i0 PRJNA1132896 2545 345 1.529412 5.2764714 Diderma niveum 372584 Evosea other_Eukaryota 257 6.45e-64   NTclustered gi|381140154|emb|HE655061.1| 372584 g2454 i0 80.912 60.4492753623188 351 46 100 17 1 345 3372 3037 Diderma niveum partial 28S rRNA gene, isolate Uk-K79 blastn 20855 257 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Diderma Diderma niveum
6661526 6661526 PRJNA1132896_P_NODE_7346_length_249_cov_2.187500_g7255_i0 PRJNA1132896 7346 249 2.1875 5.446875 Diderma europaeum 2656919 Evosea other_Eukaryota 399 6.989999999999999e-107   NTclustered gi|118577471|gb|DQ903677.1| 2656919 g7255 i0 95.582 100.076305220884 249 11 100 0 1 249 947 1195 Diderma globosum var. europaeum voucher AMFD110 small subunit ribosomal RNA gene, partial sequence blastn 24919 399 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Diderma Diderma europaeum
10487195 10487195 PRJNA1132896_P_NODE_9169_length_244_cov_0.900585_g9078_i0 PRJNA1132896 9169 244 0.900585 2.1974274 Physarum polycephalum 5791 Evosea other_Eukaryota 195 3.46e-45   NTclustered gi|326632058|gb|HQ849399.1| 5791 g9078 i0 83.178 3.70901639344262 214 34 87 2 32 244 2058 2270 Physarum polycephalum strain M3CVIII 23S large subunit ribosomal RNA, complete sequence; mitochondrial blastn 905 195 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
12510500 12510500 PRJNA1132896_P_NODE_490_length_749_cov_1.326923_g404_i0 PRJNA1132896 490 749 1.326923 9.93865327 Didymium 5792 Evosea other_Eukaryota 433 2.2899999999999996e-116   NTclustered gi|2687|emb|X60210.1| 5793 g404 i0 85.45 6.07076101468625 433 44 58 11 1 431 1769 2184 D.iridis LSU rRNA gene blastn 4547 433 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
14312587 14312587 PRJNA1132896_P_NODE_812_length_571_cov_4.819277_g721_i0 PRJNA1132896 812 571 4.819277 27.51807167 Dictyostelium purpureum 5786 Evosea other_Eukaryota 254 1.44e-62   NTclustered gi|330799393|ref|XM_003287682.1| 5786 g721 i0 80.851 6.87565674255692 329 58 57 4 14 341 515 191 Dictyostelium purpureum 40S ribosomal protein S2 (DICPUDRAFT_32959), partial mRNA blastn 3926 254 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
19409553 19409553 PRJNA1132896_P_NODE_756_length_589_cov_4.618217_g666_i0 PRJNA1132896 756 589 4.618217 27.20129813 Dictyostelium purpureum 5786 Evosea other_Eukaryota 104 1.58e-17   NTclustered gi|330790854|ref|XM_003283463.1| 5786 g666 i0 73.759 0.721561969439728 282 66 48 6 108 388 118 392 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_93471), partial mRNA blastn 425 104 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
23235947 23235947 PRJNA1132896_P_NODE_59_length_1843_cov_3.140113_g45_i0 PRJNA1132896 59 1843 3.140113 57.87228259 Dictyostelium purpureum 5786 Evosea other_Eukaryota 966 0   NTclustered gi|330818764|ref|XM_003291461.1| 5786 g45 i0 77.348 84.1150298426479 1682 350 91 27 159 1826 1677 13 Dictyostelium purpureum heat shock protein (DICPUDRAFT_49867), partial mRNA blastn 155024 966 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;