RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1132896" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1132896 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13037373 13037373 PRJNA1132896_P_NODE_7711_length_248_cov_1.662857_g7620_i0 PRJNA1132896 7711 248 1.662857 4.12388536 Bodo saltans 75058 Euglenozoa other_Eukaryota 442 1.1399999999999995e-119   NTclustered gi|225216789|gb|FJ176704.1| 75058 g7620 i0 98.79 130.677419354839 248 3 100 0 1 248 432 185 Bodo saltans HFCC12 28S ribosomal RNA gene, partial sequence blastn 32408 442 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
17609434 17609434 PRJNA1132896_P_NODE_5934_length_262_cov_1.105820_g5843_i0 PRJNA1132896 5934 262 1.10582 2.8972484 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 409 1.23e-109   NTclustered gi|2414483|emb|Y00055.1| 5656 g5843 i0 95.019 149.858778625954 261 11 99 2 1 260 6336 6595 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 39263 412 0.992718446601942 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
20685049 20685049 PRJNA1132896_P_NODE_8457_length_246_cov_0.890173_g8366_i0 PRJNA1132896 8457 246 0.890173 2.18982558 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 193 1.25e-44   NTclustered gi|1002447406|ref|XM_015802755.1| 157538 g8366 i0 82.684 13.0731707317073 231 26 91 13 1 224 1691 1914 Leptomonas pyrrhocoris putative mitochondrial elongation factor 2 (EF2-1) mRNA blastn 3216 193 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
20685052 20685052 PRJNA1132896_P_NODE_8817_length_245_cov_0.895349_g8726_i0 PRJNA1132896 8817 245 0.895349 2.19360505 Neobodo designis 312471 Euglenozoa other_Eukaryota 414 2.45e-111   NTclustered gi|59891960|gb|AY753620.1| 312471 g8726 i0 97.531 91.4244897959184 243 5 99 1 1 243 1200 1441 Neobodo designis isolate TeToto3 18S ribosomal RNA gene, partial sequence blastn 22399 414 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;