RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1132896" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1132896 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6661540 6661540 PRJNA1132896_P_NODE_8546_length_246_cov_0.890173_g8455_i0 PRJNA1132896 8546 246 0.890173 2.18982558 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|2917940740|emb|OZ237567.1| 6108 g8455 i0 92.308 1.76422764227642 39 2 16 1 172 210 4613928 4613891 Anemonia sulcata genome assembly, chromosome: 13 blastn 434 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
12510512 12510512 PRJNA1132896_P_NODE_8270_length_247_cov_0.885057_g8179_i0 PRJNA1132896 8270 247 0.885057 2.18609079 Actiniaria 6103 Cnidaria other_Eukaryota 95.3 3.66e-15   NTclustered gi|636577270|gb|KJ483104.1| 6110 g8179 i0 91.304 26.4008097165992 69 6 28 0 2 70 3269 3337 Anthopleura elegantissima isolate aele 28S large subunit ribosomal RNA gene and external transcribed spacer, partial sequence blastn 6521 95.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anthopleura Anthopleura elegantissima
18135376 18135376 PRJNA1132896_P_NODE_3635_length_298_cov_1.222222_g3544_i0 PRJNA1132896 3635 298 1.222222 3.64222156 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 182 3.39e-41   NTclustered gi|1603789296|ref|XM_028542322.1| 151771 g3544 i0 80.335 7.58389261744966 239 47 80 0 5 243 130 368 PREDICTED: Dendronephthya gigantea ras-related protein Rap-1b-like (LOC114521782), mRNA blastn 2260 182 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;