RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1132896" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA1132896 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
283632 283632 PRJNA1132896_P_NODE_4341_length_284_cov_1.421801_g4250_i0 PRJNA1132896 4341 284 1.421801 4.03791484 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 294 3.95e-75   NTclustered gi|2754691800|gb|PP872668.1| 3003959 g4250 i0 85.87 0.971830985915493 276 39 97 0 9 284 5384 5659 MAG: Picornavirales sp. isolate TC-PLV-112 MR233-17E/429 genomic sequence blastn 276 294 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
20685022 20685022 PRJNA1132896_P_NODE_5237_length_271_cov_1.888889_g5146_i0 PRJNA1132896 5237 271 1.888889 5.11888919 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 135 2.4e-27   NTclustered gi|2754691800|gb|PP872668.1| 3003959 g5146 i0 81.765 0.627306273062731 170 24 62 6 1 168 112 276 MAG: Picornavirales sp. isolate TC-PLV-112 MR233-17E/429 genomic sequence blastn 170 135 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;