RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA1132896" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 1 ✖

bioproject 1

  • PRJNA1132896 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1558220 1558220 PRJNA1132896_P_NODE_5122_length_273_cov_1.440000_g5031_i0 PRJNA1132896 5122 273 1.44 3.9312 Candidatus Nanohalobium constans 2565781 Archaea Archaea 239 1.79e-58   NTclustered gi|1773373610|gb|CP040089.1| 2565781 g5031 i0 82.971 1.50915750915751 276 35 99 9 4 273 814063 813794 Candidatus Nanohalobium constans strain LC1Nh chromosome, complete genome blastn 412 239 1 Archaea   Nanobdellati Candidatus Nanohalarchaeota Candidatus Nanohalobia Candidatus Nanohalobiales Candidatus Nanohalobiaceae Candidatus Nanohalobium Candidatus Nanohalobium constans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;