RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1132896" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 2 ✖

bioproject 1

  • PRJNA1132896 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
283618 283618 PRJNA1132896_P_NODE_2801_length_332_cov_1.077220_g2710_i0 PRJNA1132896 2801 332 1.07722 3.5763704 Inoviridae sp. 2219103 Viruses Viruses 562 1.17e-155   NTclustered gi|2056841409|tpg|BK044138.1| 2219103 g2710 i0 97.289 11.9698795180723 332 8 100 1 1 332 831 501 MAG TPA_asm: Inoviridae sp. isolate ctOnB2, partial genome blastn 3974 562 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
2834261 2834261 PRJNA1132896_P_NODE_1763_length_403_cov_2.400000_g1672_i0 PRJNA1132896 1763 403 2.4 9.672 Inoviridae sp. 2219103 Viruses Viruses 545 1.45e-150   NTclustered gi|2056841409|tpg|BK044138.1| 2219103 g1672 i0 90.819 17.6153846153846 403 32 100 1 1 403 989 1386 MAG TPA_asm: Inoviridae sp. isolate ctOnB2, partial genome blastn 7099 545 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;