contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1129273" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 283257 | 283257 | PRJNA1129273_P_NODE_4681_length_330_cov_1.202335_g4401_i0 | PRJNA1129273 | 4681 | 330 | 1.202335 | 3.9677055 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 492 | 1.54e-134 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g4401 | i0 | 93.617 | 144.445454545455 | 329 | 21 | 99 | 0 | 1 | 329 | 7090462 | 7090134 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 47667 | 492 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 2833912 | 2833912 | PRJNA1129273_P_NODE_2403_length_501_cov_3.703271_g2127_i0 | PRJNA1129273 | 2403 | 501 | 3.703271 | 18.55338771 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 542 | 2.38e-149 | NTclustered | gi|1566495190|gb|CP012670.1| | 56 | g2127 | i0 | 86.444 | 122.61876247505 | 509 | 52 | 99 | 14 | 1 | 499 | 4849408 | 4849909 | Sorangium cellulosum strain So ceGT47 chromosome, complete genome | blastn | 61432 | 542 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 5386421 | 5386421 | PRJNA1129273_P_NODE_10065_length_244_cov_1.040936_g9785_i0 | PRJNA1129273 | 10065 | 244 | 1.040936 | 2.53988384 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 265 | 2.6e-66 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g9785 | i0 | 86.42 | 371.295081967213 | 243 | 32 | 99 | 1 | 2 | 243 | 7089278 | 7089036 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 90596 | 265 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 7936305 | 7936305 | PRJNA1129273_P_NODE_6807_length_275_cov_3.554455_g6527_i0 | PRJNA1129273 | 6807 | 275 | 3.554455 | 9.77475125 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 331 | 2.9000000000000006e-86 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g6527 | i0 | 88.489 | 18.6945454545455 | 278 | 26 | 99 | 4 | 2 | 275 | 7915569 | 7915844 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 5141 | 331 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 9211308 | 9211308 | PRJNA1129273_P_NODE_9808_length_245_cov_1.790698_g9528_i0 | PRJNA1129273 | 9808 | 245 | 1.790698 | 4.3872101 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 189 | 1.62e-43 | NTclustered | gi|2579665545|gb|CP043492.1| | 43 | g9528 | i0 | 82.192 | 2.12244897959184 | 219 | 39 | 89 | 0 | 2 | 220 | 7100432 | 7100650 | Cystobacter fuscus strain Cbf 8 chromosome, complete genome | blastn | 520 | 189 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 9959771 | 9959771 | PRJNA1129273_P_NODE_2848_length_447_cov_2.874332_g2569_i0 | PRJNA1129273 | 2848 | 447 | 2.874332 | 12.84826404 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 507 | 7.68e-139 | NTclustered | gi|470485361|ref|NR_076697.1| | 80816 | g2569 | i0 | 89.383 | 161.780760626398 | 405 | 40 | 90 | 3 | 2 | 404 | 857 | 1260 | Haliangium ochraceum strain SMP-2 23S ribosomal RNA gene, complete sequence | blastn | 72316 | 507 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Haliangium | Haliangium ochraceum | |||
| 11761865 | 11761865 | PRJNA1129273_P_NODE_5390_length_305_cov_1.099138_g5110_i0 | PRJNA1129273 | 5390 | 305 | 1.099138 | 3.3523709 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 339 | 1.95e-88 | NTclustered | gi|28395339|gb|AY190664.1| | 56 | g5110 | i0 | 86.928 | 82.7672131147541 | 306 | 34 | 99 | 5 | 2 | 304 | 610 | 912 | Polyangium cellulosum strain So9881 clone 3 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence | blastn | 25244 | 339 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 13785001 | 13785001 | PRJNA1129273_P_NODE_1591_length_648_cov_4.833043_g1327_i0 | PRJNA1129273 | 1591 | 648 | 4.833043 | 31.31811864 | Polyangiaceae | 49 | Bacteria | Bacteria | 761 | 0 | NTclustered | gi|169977285|emb|AM946600.1| | 52 | g1327 | i0 | 88.18 | 124.873456790123 | 643 | 70 | 98 | 6 | 2 | 639 | 1422 | 2063 | Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 | blastn | 80918 | 761 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 13785019 | 13785019 | PRJNA1129273_P_NODE_7271_length_268_cov_1.753846_g6991_i0 | PRJNA1129273 | 7271 | 268 | 1.753846 | 4.70030728 | Myxococcaceae | 31 | Bacteria | Bacteria | 327 | 3.64e-85 | NTclustered | gi|470488931|ref|NR_076895.1| | 33 | g6991 | i0 | 88.806 | 189.026119402985 | 268 | 28 | 99 | 2 | 1 | 267 | 837 | 571 | Myxococcus fulvus strain HW-1 23S ribosomal RNA gene, complete sequence | blastn | 50659 | 327 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus fulvus | ||
| 20158107 | 20158107 | PRJNA1129273_P_NODE_9836_length_245_cov_1.389535_g9556_i0 | PRJNA1129273 | 9836 | 245 | 1.389535 | 3.40436075 | Stigmatella | 40 | Bacteria | Bacteria | 394 | 3.189999999999999e-105 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g9556 | i0 | 95.885 | 248.367346938776 | 243 | 10 | 99 | 0 | 2 | 244 | 838 | 1080 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 60850 | 394 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;