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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA1129273" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1129273 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1557833 1557833 PRJNA1129273_P_NODE_3042_length_428_cov_1.281690_g2763_i0 PRJNA1129273 3042 428 1.28169 5.4856332 Radiomyces spectabilis 64574 Fungi Fungi 171 1.0899999999999998e-37   NTclustered gi|2323725995|ref|XM_051568077.1| 64574 g2763 i0 78.491 2.04439252336449 265 53 61 4 11 273 435 173 Radiomyces spectabilis guanine nucleotide-binding protein subunit beta-2-like 1 (BYT42DRAFT_567288), partial mRNA blastn 875 171 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
5386440 5386440 PRJNA1129273_P_NODE_1265_length_754_cov_9.365639_g1014_i0 PRJNA1129273 1265 754 9.365639 70.61691806 Rhizopus stolonifer 4846 Fungi Fungi 1284 0   NTclustered gi|1336687659|gb|MG865992.1| 4846 g1014 i0 97.87 89.0384615384615 751 0 99 1 2 752 735 1 Rhizopus stolonifer voucher Rhs sequence blastn 67135 1284 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
15586216 15586216 PRJNA1129273_P_NODE_9413_length_247_cov_1.649425_g9133_i0 PRJNA1129273 9413 247 1.649425 4.07407975 Phycomyces blakesleeanus 4837 Fungi Fungi 183 7.59e-42   NTclustered gi|1069961703|ref|XM_018438711.1| 763407 g9133 i0 86.31 54.748987854251 168 23 68 0 79 246 211 44 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 13523 183 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
16334079 16334079 PRJNA1129273_P_NODE_1973_length_570_cov_10.440644_g1702_i0 PRJNA1129273 1973 570 10.440644 59.5116708 Eukaryota 2759 Fungi Fungi 1051 0   NTclustered gi|1272210360|gb|KY780631.1| 4846 g1702 i0 100 99.1175438596491 569 0 99 0 1 569 571 1139 Rhizopus stolonifer strain cy3 18S ribosomal RNA gene, partial sequence blastn 56497 1051 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
16860442 16860442 PRJNA1129273_P_NODE_5134_length_313_cov_1.291667_g4854_i0 PRJNA1129273 5134 313 1.291667 4.04291771 Rhizopus arrhizus 64495 Fungi Fungi 555 1.8299999999999998e-153   NTclustered gi|58578599|ref|NC_006836.1| 64495 g4854 i0 98.718 12.415335463258801 312 4 99 0 1 312 1096 785 Rhizopus oryzae mitochondrion, complete genome blastn 3886 555 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
19409114 19409114 PRJNA1129273_P_NODE_11316_length_211_cov_11.115942_g11036_i0 PRJNA1129273 11316 211 11.115942 23.45463762 Rhizopus stolonifer 4846 Fungi Fungi 390 3.459999999999999e-104   NTclustered gi|82398553|gb|DQ273817.1| 4846 g11036 i0 100 100.706161137441 211 0 100 0 1 211 2548 2758 Rhizopus stolonifer isolate AFTOL-ID 632 28S ribosomal RNA gene, partial sequence blastn 21249 390 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
22708534 22708534 PRJNA1129273_P_NODE_6738_length_276_cov_13.216749_g6458_i0 PRJNA1129273 6738 276 13.216749 36.47822724 Eukaryota 2759 Fungi Fungi 508 1.2499999999999999e-139   NTclustered gi|734668976|gb|KJ408540.1| 4846 g6458 i0 100 99.6376811594203 275 0 99 0 2 276 19 293 Rhizopus stolonifer strain FSU9872 18S ribosomal RNA gene, partial sequence blastn 27500 508 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
24509250 24509250 PRJNA1129273_P_NODE_7900_length_260_cov_1.235294_g7620_i0 PRJNA1129273 7900 260 1.235294 3.2117644 Rhizopus arrhizus 64495 Fungi Fungi 388 1.59e-103   NTclustered gi|58578599|ref|NC_006836.1| 64495 g7620 i0 93.846 42.8307692307692 260 13 99 3 2 260 1530 1787 Rhizopus oryzae mitochondrion, complete genome blastn 11136 388 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
25257977 25257977 PRJNA1129273_P_NODE_11200_length_223_cov_17.780000_g10920_i0 PRJNA1129273 11200 223 17.78 39.6494 Fungi 4751 Fungi Fungi 411 2.84e-110   NTclustered gi|658131632|emb|HF968958.1| 4874 g10920 i0 100 143.991031390135 222 0 99 0 2 223 2219 1998 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 32110 411 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;