RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1129273" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA1129273 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4110257 4110257 PRJNA1129273_P_NODE_3324_length_404_cov_2.782477_g3045_i0 PRJNA1129273 3324 404 2.782477 11.24120708 Soybean thrips dicistrovirus 1 2797876 Viruses Viruses 263 1.64e-65   NTclustered gi|1954985862|gb|MT195550.1| 2797876 g3045 i0 78.803 0.992574257425743 401 77 98 7 8 404 7182 6786 Soybean thrips dicistrovirus 1 strain STN1, complete genome blastn 401 263 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Soybean thrips dicistrovirus 1
6661121 6661121 PRJNA1129273_P_NODE_4786_length_326_cov_1.221344_g4506_i0 PRJNA1129273 4786 326 1.221344 3.98158144 Zebrafish picornavirus 1 2304617 Viruses Viruses 569 6.839999999999998e-158   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g4506 i0 98.452 2.95705521472393 323 5 99 0 4 326 719 397 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 964 569 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
10486763 10486763 PRJNA1129273_P_NODE_3349_length_402_cov_1.844985_g3070_i0 PRJNA1129273 3349 402 1.844985 7.4168397 Polycipiviridae sp. 2496155 Viruses Viruses 52.8 0.039   NTclustered gi|2756421824|gb|PP744841.1| 2496155 g3070 i0 90.244 0.101990049751244 41 3 10 1 296 335 9211 9171 MAG: Polycipiviridae sp. isolate 086_167342 genomic sequence blastn 41 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Polycipiviridae   Polycipiviridae sp.
19409181 19409181 PRJNA1129273_P_NODE_8596_length_251_cov_3.078652_g8316_i0 PRJNA1129273 8596 251 3.078652 7.72741652 Sopawad virus 3131649 Viruses Viruses 366 7.15e-97   NTclustered gi|2717323044|gb|PP173950.1| 3131649 g8316 i0 93.522 25.8446215139442 247 14 98 1 5 251 4090 4334 MAG: Sopawad virus isolate SP1A_k141_78953 genomic sequence blastn 6487 366 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Sopawad virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;