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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA1129273" and tax_clade = "Sar"

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tax_phylum 4

tax_superkingdom 1

tax_clade 1

  • Sar · 24 ✖

bioproject 1

  • PRJNA1129273 · 24 ✖

analysis 1

  • blastn · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
283239 283239 PRJNA1129273_P_NODE_1601_length_645_cov_10.473776_g1336_i0 PRJNA1129273 1601 645 10.473776 67.5558552 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 989 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1336 i0 94.41 63.0186046511628 644 34 99 2 2 644 651 9 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 40647 989 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
283310 283310 PRJNA1129273_P_NODE_9781_length_245_cov_3.424419_g9501_i0 PRJNA1129273 9781 245 3.424419 8.38982655 Arachnula sp. CL12 862247 SAR_Eukaryotes SAR_Eukaryotes 237 5.69e-58   NTclustered gi|302026178|gb|GQ377695.1| 862247 g9501 i0 84.362 44.9142857142857 243 36 99 2 3 244 1072 831 Arachnula sp. CL12 elongation factor 1 alpha mRNA, partial cds blastn 11004 237 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL12
1557828 1557828 PRJNA1129273_P_NODE_2002_length_564_cov_5.482688_g1729_i0 PRJNA1129273 2002 564 5.482688 30.92236032 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 822 0   NTclustered gi|300521444|gb|GQ377690.1| 151077 g1729 i0 93.06 8.25709219858156 562 39 99 0 2 563 733 172 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 4657 822 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
2833935 2833935 PRJNA1129273_P_NODE_5803_length_292_cov_3.607306_g5523_i0 PRJNA1129273 5803 292 3.607306 10.53333352 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 274 5.309999999999998e-69   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g5523 i0 84.138 48.4554794520548 290 39 98 7 2 288 3703 3988 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 14149 274 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
6661096 6661096 PRJNA1129273_P_NODE_10886_length_235_cov_2.561728_g10606_i0 PRJNA1129273 10886 235 2.561728 6.0200608 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 318 1.8799999999999998e-82   NTclustered gi|110277428|gb|DQ662856.1| 151077 g10606 i0 91.379 0.987234042553191 232 20 99 0 4 235 1575 1344 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 232 318 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
7409568 7409568 PRJNA1129273_P_NODE_3886_length_367_cov_7.608844_g3606_i0 PRJNA1129273 3886 367 7.608844 27.92445748 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 279 1.47e-70   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g3606 i0 98.125 2.3841961852861 160 3 44 0 207 366 3082 2923 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 875 279 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
7409585 7409585 PRJNA1129273_P_NODE_7086_length_271_cov_1.535354_g6806_i0 PRJNA1129273 7086 271 1.535354 4.16080934 root 1 Root_unresolved Root_unresolved 220 6.44e-53   NTclustered gi|159993|gb|M34540.1|PARCAM 5888 g6806 i0 81.481 94.2509225092251 270 48 99 2 1 269 542 274 P.tetraurelia calmodulin gene, complete cds blastn 25542 220 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
9211242 9211242 PRJNA1129273_P_NODE_1428_length_698_cov_8.916800_g1168_i0 PRJNA1129273 1428 698 8.9168 62.239264 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 907 0   NTclustered gi|300676719|gb|GQ377693.1| 151077 g1168 i0 90.657 8.2621776504298 685 60 98 4 14 695 698 15 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 5767 907 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9959779 9959779 PRJNA1129273_P_NODE_4408_length_342_cov_2.750929_g4128_i0 PRJNA1129273 4408 342 2.750929 9.40817718 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 616 9.139999999999999e-172   NTclustered gi|2223186636|gb|MW310239.1| 151077 g4128 i0 99.123 94.6754385964912 342 3 100 0 1 342 12 353 Chilodonella uncinata isolate 20200709 small subunit ribosomal RNA gene, partial sequence blastn 32379 621 0.99194847020934 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
10486774 10486774 PRJNA1129273_P_NODE_5329_length_307_cov_0.978632_g5049_i0 PRJNA1129273 5329 307 0.978632 3.00440024 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 472 1.86e-128   NTclustered gi|347439271|gb|JN111984.1| 151077 g5049 i0 94.719 100.628664495114 303 16 99 0 5 307 914 612 Chilodonella uncinata strain USA_SC2 clone SP1 beta tubulin (btub) gene, partial cds; macronuclear blastn 30893 472 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
11761842 11761842 PRJNA1129273_P_NODE_11170_length_227_cov_2.006494_g10890_i0 PRJNA1129273 11170 227 2.006494 4.55474138 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 399 6.269999999999998e-107   NTclustered gi|300676714|gb|GQ377691.1| 151077 g10890 i0 98.667 58.2907488986784 225 3 99 0 2 226 247 23 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 13232 399 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
11761848 11761848 PRJNA1129273_P_NODE_2330_length_512_cov_1.895216_g2054_i0 PRJNA1129273 2330 512 1.895216 9.70350592 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 630 5.0599999999999985e-176   NTclustered gi|110277428|gb|DQ662856.1| 151077 g2054 i0 88.998 44.6015625 509 56 99 0 3 511 648 140 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 22836 630 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
11761888 11761888 PRJNA1129273_P_NODE_7990_length_258_cov_9.789189_g7710_i0 PRJNA1129273 7990 258 9.789189 25.25610762 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 460 3.29e-125   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g7710 i0 99.216 99.5930232558139 255 2 99 0 3 257 920 666 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 25695 460 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
13036959 13036959 PRJNA1129273_P_NODE_3571_length_387_cov_1.703822_g3291_i0 PRJNA1129273 3571 387 1.703822 6.59379114 Tetmemena sp. Y1 1640447 SAR_Eukaryotes SAR_Eukaryotes 239 2.64e-58   NTclustered gi|1227052606|gb|KY038460.1| 1640447 g3291 i0 78.036 72.7312661498708 387 79 99 6 3 386 1625 1242 Tetmemena sp. Y1 heat shock protein 70 (hsp70) gene, partial cds; macronuclear blastn 28147 239 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Tetmemena Tetmemena sp. Y1
13036965 13036965 PRJNA1129273_P_NODE_4911_length_322_cov_1.236948_g4631_i0 PRJNA1129273 4911 322 1.236948 3.98297256 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 472 1.96e-128   NTclustered gi|110277428|gb|DQ662856.1| 151077 g4631 i0 93.396 93.0869565217391 318 21 99 0 5 322 1044 727 Chilodonella uncinata heat shock protein 90 gene, partial cds; macronuclear blastn 29974 472 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15586171 15586171 PRJNA1129273_P_NODE_2993_length_433_cov_10.436111_g2714_i0 PRJNA1129273 2993 433 10.436111 45.18836063 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 693 0   NTclustered gi|300676714|gb|GQ377691.1| 151077 g2714 i0 95.804 9.4919168591224 429 18 99 0 4 432 22 450 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 4110 693 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15586180 15586180 PRJNA1129273_P_NODE_433_length_1340_cov_11.306235_g297_i0 PRJNA1129273 433 1340 11.306235 151.503549 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1921 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g297 i0 95.439 38.0716417910448 1206 53 90 2 50 1254 1 1205 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 51016 1921 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16860428 16860428 PRJNA1129273_P_NODE_3554_length_388_cov_3.615873_g3274_i0 PRJNA1129273 3554 388 3.615873 14.02958724 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 695 0   NTclustered gi|238617605|gb|FJ973380.1| 45107 g3274 i0 99.221 100.216494845361 385 3 99 0 1 385 1203 1587 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 38884 695 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
17609354 17609354 PRJNA1129273_P_NODE_8894_length_250_cov_0.870056_g8614_i0 PRJNA1129273 8894 250 0.870056 2.17514 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 459 1.1399999999999998e-124   NTclustered gi|33520246|gb|AY273991.1| 4787 g8614 i0 100 99.208 248 0 99 0 2 249 411 164 Phytophthora infestans large subunit ribosomal RNA gene, partial sequence blastn 24802 459 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
19409127 19409127 PRJNA1129273_P_NODE_3076_length_425_cov_8.059659_g2797_i0 PRJNA1129273 3076 425 8.059659 34.25355075 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 623 6.919999999999998e-174   NTclustered gi|301014695|gb|GQ377692.1| 151077 g2797 i0 93.16 60.3764705882353 424 29 99 0 1 424 14 437 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 25660 623 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19409137 19409137 PRJNA1129273_P_NODE_4436_length_341_cov_1.813433_g4156_i0 PRJNA1129273 4436 341 1.813433 6.18380653 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 204 8.41e-48   NTclustered gi|662862628|gb|KJ000269.1| 151077 g4156 i0 83.482 1.61876832844575 224 31 65 6 93 313 797 577 Chilodonella uncinata strain ATCC PRA-256 clone P6 protein kinase domain containing protein gene, partial cds; macronuclear blastn 552 204 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19409145 19409145 PRJNA1129273_P_NODE_5896_length_290_cov_1.852535_g5616_i0 PRJNA1129273 5896 290 1.852535 5.3723515 Spumella sp. OF-40 1432661 SAR_Eukaryotes SAR_Eukaryotes 331 3.0800000000000006e-86   NTclustered gi|677286268|gb|KF997856.1| 1432661 g5616 i0 87.456 84.048275862069 287 36 99 0 4 290 985 1271 Spumella sp. OF-40 translation elongation factor 1-alpha (EF1A) mRNA, complete cds blastn 24374 331 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sp. OF-40
23983978 23983978 PRJNA1129273_P_NODE_3079_length_425_cov_4.082386_g2800_i0 PRJNA1129273 3079 425 4.082386 17.3501405 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 763 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2800 i0 99.059 94.5905882352941 425 4 100 0 1 425 2373 2797 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 40201 763 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
25257996 25257996 PRJNA1129273_P_NODE_6900_length_274_cov_1.512438_g6620_i0 PRJNA1129273 6900 274 1.512438 4.14408012 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 272 1.77e-68   NTclustered gi|2386258192|ref|XM_001455088.2| 5888 g6620 i0 85.24 80.6386861313869 271 33 98 5 1 269 1109 1374 Paramecium tetraurelia uncharacterized protein (GSPATT00021361001), mRNA blastn 22095 274 0.992700729927007 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;