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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1126661" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1126661 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1556756 1556756 PRJNA1126661_P_NODE_16422_length_326_cov_4.660079_g15893_i0 PRJNA1126661 16422 326 4.660079 15.19185754 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.009   NTclustered gi|2912989933|dbj|AP039594.1| 145626 g15893 i0 92.308 0.291411042944785 39 2 12 1 268 305 66208179 66208141 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 13, sequence blastn 95 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
6660615 6660615 PRJNA1126661_P_NODE_75566_length_239_cov_3.759036_g75036_i0 PRJNA1126661 75566 239 3.759036 8.98409604 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.006   NTclustered gi|2912991694|dbj|AP039596.1| 145626 g75036 i0 96.875 0.133891213389121 32 1 13 0 131 162 9727043 9727012 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
15585763 15585763 PRJNA1126661_P_NODE_86333_length_203_cov_6.438462_g85803_i0 PRJNA1126661 86333 203 6.438462 13.07007786 Milax gagates 700815 Mollusca Mollusca 375 9.24e-100   NTclustered gi|2207883960|gb|OM982842.1| 700815 g85803 i0 100 84.7339901477832 203 0 100 0 1 203 393 191 Milax gagates isolate 2753 large subunit ribosomal RNA gene, partial sequence blastn 17201 375 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Milacidae Milax Milax gagates
20683754 20683754 PRJNA1126661_P_NODE_30237_length_326_cov_2.442688_g29708_i0 PRJNA1126661 30237 326 2.442688 7.96316288 Mytilus trossulus 6551 Mollusca Mollusca 54.7 0.009   NTclustered gi|2694030969|ref|XM_063571685.1| 6551 g29708 i0 96.875 0.699386503067485 32 1 10 0 226 257 822 791 PREDICTED: Mytilus trossulus ankyrin repeat and protein kinase domain-containing protein 1-like (LOC134711218), mRNA blastn 228 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
24508050 24508050 PRJNA1126661_P_NODE_11640_length_326_cov_6.328063_g11111_i0 PRJNA1126661 11640 326 6.328063 20.62948538 Octopus bimaculoides 37653 Mollusca Mollusca 52.8 0.031   NTclustered gi|2427252700|ref|XM_052970058.1| 37653 g11111 i0 100 0.257668711656442 28 0 9 0 229 256 1308 1335 PREDICTED: Octopus bimaculoides uncharacterized LOC106883669 (LOC106883669), transcript variant X3, mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
24508814 24508814 PRJNA1126661_P_NODE_81140_length_220_cov_18.435374_g80610_i0 PRJNA1126661 81140 220 18.435374 40.5578228 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.002   NTclustered gi|2912991694|dbj|AP039596.1| 145626 g80610 i0 96.97 0.15 33 1 15 0 178 210 17870550 17870582 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence blastn 33 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;