contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA1126198" and tax_phylum = "Thermodesulfobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 281810 | 281810 | PRJNA1126198_P_NODE_481341_length_235_cov_2.253086_g480620_i0 | PRJNA1126198 | 481341 | 235 | 2.253086 | 5.2947521 | Pseudodesulfovibrio cashew | 2678688 | Bacteria | Bacteria | 230 | 9.07e-56 | NTclustered | gi|1785261979|gb|CP046400.1| | 2678688 | g480620 | i0 | 92.547 | 73.6127659574468 | 161 | 11 | 70 | 1 | 1 | 161 | 2894859 | 2894700 | Pseudodesulfovibrio cashew strain SRB007 chromosome, complete genome | blastn | 17299 | 230 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Pseudodesulfovibrio | Pseudodesulfovibrio cashew | ||
| 7408338 | 7408338 | PRJNA1126198_P_NODE_452706_length_243_cov_1.835294_g451985_i0 | PRJNA1126198 | 452706 | 243 | 1.835294 | 4.45976442 | Desulfovibrionaceae | 194924 | Bacteria | Bacteria | 259 | 1.2e-64 | NTclustered | gi|2908463109|gb|CP168306.1| | 81425 | g451985 | i0 | 88.995 | 77.037037037037 | 209 | 23 | 86 | 0 | 35 | 243 | 3446965 | 3447173 | MAG: Desulfovibrio aminophilus isolate Co chromosome, complete genome | blastn | 18720 | 259 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio aminophilus | ||
| 10485268 | 10485268 | PRJNA1126198_P_NODE_462509_length_242_cov_2.497041_g461788_i0 | PRJNA1126198 | 462509 | 242 | 2.497041 | 6.04283922 | Desulfolutivibrio sulfoxidireducens | 2773299 | Bacteria | Bacteria | 143 | 1.2599999999999998e-29 | NTclustered | gi|1863429635|gb|CP045508.1| | 2773299 | g461788 | i0 | 92.857 | 15.8553719008264 | 98 | 7 | 40 | 0 | 145 | 242 | 2339813 | 2339716 | Desulfolutivibrio sulfoxidireducens strain DSM 107105 chromosome, complete genome | blastn | 3837 | 143 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfolutivibrio | Desulfolutivibrio sulfoxidireducens | ||
| 11759931 | 11759931 | PRJNA1126198_P_NODE_282550_length_270_cov_1.182741_g281829_i0 | PRJNA1126198 | 282550 | 270 | 1.182741 | 3.1934007 | Desulfovibrio aminophilus | 81425 | Bacteria | Bacteria | 189 | 1.8099999999999993e-43 | NTclustered | gi|2908463109|gb|CP168306.1| | 81425 | g281829 | i0 | 81.818 | 14.0814814814815 | 231 | 36 | 84 | 3 | 6 | 233 | 3141556 | 3141783 | MAG: Desulfovibrio aminophilus isolate Co chromosome, complete genome | blastn | 3802 | 189 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio aminophilus | ||
| 12508895 | 12508895 | PRJNA1126198_P_NODE_129470_length_324_cov_1.143426_g128751_i0 | PRJNA1126198 | 129470 | 324 | 1.143426 | 3.70470024 | Candidatus Electrothrix | 1859128 | Bacteria | Bacteria | 139 | 2.27e-28 | NTclustered | gi|2322424362|emb|OW818652.1| | 3036123 | g128751 | i0 | 97.531 | 25.4135802469136 | 81 | 2 | 25 | 0 | 197 | 277 | 4056503 | 4056583 | Candidatus Electrothrix laxa isolate HOU-scMAG genome assembly, chromosome: 1 | blastn | 8234 | 139 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Candidatus Electrothrix | Candidatus Electrothrix laxa | ||
| 14310216 | 14310216 | PRJNA1126198_P_NODE_275032_length_272_cov_1.055276_g274311_i0 | PRJNA1126198 | 275032 | 272 | 1.055276 | 2.87035072 | Desulfofustis limnaeus | 2740163 | Bacteria | Bacteria | 135 | 2.4100000000000003e-27 | NTclustered | gi|2211518257|dbj|AP025516.1| | 2740163 | g274311 | i0 | 90.291 | 53.1544117647059 | 103 | 10 | 38 | 0 | 114 | 216 | 1951522 | 1951624 | Desulfobulbaceae bacterium PPLL DNA, complete genome | blastn | 14458 | 135 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfocapsaceae | Desulfofustis | Desulfofustis limnaeus | ||
| 14310245 | 14310245 | PRJNA1126198_P_NODE_289052_length_268_cov_1.594872_g288331_i0 | PRJNA1126198 | 289052 | 268 | 1.594872 | 4.27425696 | Desulfoluna limicola | 2810562 | Bacteria | Bacteria | 209 | 1.38e-49 | NTclustered | gi|2158810072|dbj|AP024488.1| | 2810562 | g288331 | i0 | 91.503 | 20.5 | 153 | 12 | 57 | 1 | 3 | 155 | 5957558 | 5957407 | Desulfoluna sp. ASN36 ASN36 DNA, complete genome | blastn | 5494 | 209 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfolunaceae | Desulfoluna | Desulfoluna limicola | ||
| 15584646 | 15584646 | PRJNA1126198_P_NODE_458493_length_243_cov_0.917647_g457772_i0 | PRJNA1126198 | 458493 | 243 | 0.917647 | 2.22988221 | Desulfarculia bacterium | 3065862 | Bacteria | Bacteria | 189 | 1.6e-43 | NTclustered | gi|2621702698|emb|OY759590.1| | 3065862 | g457772 | i0 | 83.744 | 552.975308641975 | 203 | 30 | 83 | 3 | 23 | 223 | 337109 | 337310 | MAG: Desulfarculia bacterium isolate 49400898-fc5b-42b7-bef8-a303f8702bb8 genome assembly, chromosome: 1 | blastn | 134373 | 189 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculia bacterium | |||||
| 16858469 | 16858469 | PRJNA1126198_P_NODE_244994_length_279_cov_1.893204_g244273_i0 | PRJNA1126198 | 244994 | 279 | 1.893204 | 5.28203916 | Solidesulfovibrio carbinolicus | 296842 | Bacteria | Bacteria | 294 | 3.87e-75 | NTclustered | gi|1566432249|gb|CP026538.1| | 296842 | g244273 | i0 | 85.714 | 94.0358422939068 | 280 | 38 | 100 | 2 | 1 | 279 | 1800280 | 1800558 | Solidesulfovibrio carbinolicus strain DSM 3852 chromosome, complete genome | blastn | 26236 | 294 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Solidesulfovibrio | Solidesulfovibrio carbinolicus | ||
| 18133495 | 18133495 | PRJNA1126198_P_NODE_468455_length_242_cov_0.923077_g467734_i0 | PRJNA1126198 | 468455 | 242 | 0.923077 | 2.23384634 | Candidatus Electrothrix laxa | 3036123 | Bacteria | Bacteria | 62.1 | 3.62e-5 | NTclustered | gi|2322424362|emb|OW818652.1| | 3036123 | g467734 | i0 | 85.965 | 0.632231404958678 | 57 | 8 | 24 | 0 | 160 | 216 | 2281854 | 2281798 | Candidatus Electrothrix laxa isolate HOU-scMAG genome assembly, chromosome: 1 | blastn | 153 | 62.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Candidatus Electrothrix | Candidatus Electrothrix laxa | ||
| 20683113 | 20683113 | PRJNA1126198_P_NODE_414477_length_247_cov_1.327586_g413756_i0 | PRJNA1126198 | 414477 | 247 | 1.327586 | 3.27913742 | Desulfovibrio aminophilus | 81425 | Bacteria | Bacteria | 152 | 2.1399999999999998e-32 | NTclustered | gi|2908463109|gb|CP168306.1| | 81425 | g413756 | i0 | 84.177 | 6.16194331983806 | 158 | 23 | 64 | 2 | 18 | 174 | 695593 | 695437 | MAG: Desulfovibrio aminophilus isolate Co chromosome, complete genome | blastn | 1522 | 152 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio aminophilus | ||
| 21958584 | 21958584 | PRJNA1126198_P_NODE_471618_length_242_cov_0.911243_g470897_i0 | PRJNA1126198 | 471618 | 242 | 0.911243 | 2.20520806 | Nitratidesulfovibrio sp. HK-II | 2009266 | Bacteria | Bacteria | 154 | 5.81e-33 | NTclustered | gi|2791413552|dbj|AP036014.1| | 2009266 | g470897 | i0 | 78.099 | 3.95454545454545 | 242 | 53 | 100 | 0 | 1 | 242 | 2532068 | 2531827 | Nitratidesulfovibrio sp. HK-II DNA, complete genome | blastn | 957 | 154 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Nitratidesulfovibrio | Nitratidesulfovibrio sp. HK-II | ||
| 23234016 | 23234016 | PRJNA1126198_P_NODE_426939_length_246_cov_0.901734_g426218_i0 | PRJNA1126198 | 426939 | 246 | 0.901734 | 2.21826564 | Desulfatiglandales bacterium | 3024416 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2621702716|emb|OY759599.1| | 3024416 | g426218 | i0 | 90.698 | 0.17479674796748 | 43 | 3 | 17 | 1 | 92 | 133 | 2786102 | 2786060 | MAG: Desulfatiglandales bacterium isolate ef928343-fb2c-4ac1-bd77-a4af7a033044 genome assembly, chromosome: 1 | blastn | 43 | 56.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfatiglandales | Desulfatiglandales bacterium | ||||
| 24507373 | 24507373 | PRJNA1126198_P_NODE_324420_length_260_cov_1.657754_g323699_i0 | PRJNA1126198 | 324420 | 260 | 1.657754 | 4.3101604 | Desulfovibrio aminophilus | 81425 | Bacteria | Bacteria | 200 | 8e-47 | NTclustered | gi|2908463109|gb|CP168306.1| | 81425 | g323699 | i0 | 81.667 | 20.4769230769231 | 240 | 44 | 92 | 0 | 21 | 260 | 3443879 | 3444118 | MAG: Desulfovibrio aminophilus isolate Co chromosome, complete genome | blastn | 5324 | 200 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio aminophilus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;