RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1126198" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1126198 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5384365 5384365 PRJNA1126198_P_NODE_197905_length_293_cov_1.754545_g197185_i0 PRJNA1126198 197905 293 1.754545 5.14081685 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 54.7 0.008   NTclustered gi|2519013294|ref|XM_057458058.1| 13093 g197185 i0 100 0.296928327645051 29 0 10 0 136 164 5596 5568 PREDICTED: Hydractinia symbiolongicarpus dedicator of cytokinesis protein 1-like (LOC130655320), transcript variant X2, mRNA blastn 87 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
11760298 11760298 PRJNA1126198_P_NODE_438090_length_245_cov_0.901163_g437369_i0 PRJNA1126198 438090 245 0.901163 2.20784935 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940720|emb|OZ237562.1| 6108 g437369 i0 100 0.828571428571429 30 0 12 0 5 34 14348385 14348356 Anemonia sulcata genome assembly, chromosome: 8 blastn 203 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
16858992 16858992 PRJNA1126198_P_NODE_467674_length_242_cov_0.923077_g466953_i0 PRJNA1126198 467674 242 0.923077 2.23384634 Orbicella faveolata 48498 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|1176089270|ref|XM_020759344.1| 48498 g466953 i0 94.595 0.735537190082645 37 0 14 2 86 120 2162 2126 PREDICTED: Orbicella faveolata uncharacterized LOC110053151 (LOC110053151), mRNA blastn 178 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
19407676 19407676 PRJNA1126198_P_NODE_484356_length_232_cov_3.547170_g483635_i0 PRJNA1126198 484356 232 3.54717 8.2294344 Parvicapsula minibicornis 109801 Cnidaria other_Eukaryota 121 5.61e-23   NTclustered gi|605060084|gb|KF874224.1| 109801 g483635 i0 86.486 49.5862068965517 111 13 48 2 1 111 341 233 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 11504 121 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;