RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1126198" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1126198 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4108131 4108131 PRJNA1126198_P_NODE_143084_length_316_cov_2.444444_g142365_i0 PRJNA1126198 143084 316 2.444444 7.72444304 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 248 3.5199999999999996e-61   NTclustered gi|2893358453|emb|OZ220745.1| 2026734 g142365 i0 81.25 54.629746835443 320 48 100 9 1 316 2300156 2299845 MAG: Dehalococcoidia bacterium isolate d99f35f8-e104-4752-81ca-da635d51ba71 genome assembly, chromosome: 1 blastn 17263 248 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
4108442 4108442 PRJNA1126198_P_NODE_312404_length_263_cov_1.226316_g311683_i0 PRJNA1126198 312404 263 1.226316 3.22521108 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 464 2.5999999999999993e-126   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g311683 i0 98.479 931.619771863118 263 4 100 0 1 263 1859871 1860133 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 245016 464 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
5384913 5384913 PRJNA1126198_P_NODE_449105_length_244_cov_0.906433_g448384_i0 PRJNA1126198 449105 244 0.906433 2.21169652 Anaerolineaceae bacterium oral taxon 439 1889813 Bacteria Bacteria 446 8.639999999999999e-121   NTclustered gi|1061024832|gb|CP017039.1| 1889813 g448384 i0 99.59 1 244 1 100 0 1 244 2491027 2491270 Anaerolineaceae bacterium oral taxon 439 strain W11661 chromosome, complete genome blastn 244 446 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium oral taxon 439
11759702 11759702 PRJNA1126198_P_NODE_162370_length_307_cov_1.965812_g161651_i0 PRJNA1126198 162370 307 1.965812 6.03504284 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 470 6.67e-128   NTclustered gi|2874253981|emb|OY970306.1| 1672391 g161651 i0 94.175 633.791530944625 309 16 100 2 1 307 1027573 1027265 MAG: uncultured Chloroflexia bacterium isolate MFD02134.bin.c.1 genome assembly, chromosome: 1 blastn 194574 470 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
15584613 15584613 PRJNA1126198_P_NODE_446313_length_244_cov_0.912281_g445592_i0 PRJNA1126198 446313 244 0.912281 2.22596564 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 422 1.46e-113   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g445592 i0 97.951 348.040983606557 244 3 100 2 1 244 1859468 1859227 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 84922 422 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
18133318 18133318 PRJNA1126198_P_NODE_396875_length_249_cov_0.886364_g396154_i0 PRJNA1126198 396875 249 0.886364 2.20704636 uncultured Caldilinea sp. 435295 Bacteria Bacteria 368 1.97e-97   NTclustered gi|443300639|gb|KC216670.1| 435295 g396154 i0 95.652 99.0602409638554 230 8 92 2 1 229 229 1 Uncultured Caldilinea sp. clone PBW-95 16S ribosomal RNA gene, partial sequence blastn 24666 368 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae Caldilinea uncultured Caldilinea sp.
21958327 21958327 PRJNA1126198_P_NODE_370938_length_252_cov_0.865922_g370217_i0 PRJNA1126198 370938 252 0.865922 2.18212344 Anaerolineaceae bacterium oral taxon 439 1889813 Bacteria Bacteria 455 1.49e-123   NTclustered gi|1061024832|gb|CP017039.1| 1889813 g370217 i0 99.206 1 252 2 100 0 1 252 902986 902735 Anaerolineaceae bacterium oral taxon 439 strain W11661 chromosome, complete genome blastn 252 455 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium oral taxon 439
23233948 23233948 PRJNA1126198_P_NODE_402379_length_248_cov_1.697143_g401658_i0 PRJNA1126198 402379 248 1.697143 4.20891464 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 207 4.52e-49   NTclustered gi|2874254133|emb|OY970218.1| 1672391 g401658 i0 82.627 0.951612903225806 236 39 95 2 9 243 811044 811278 MAG: uncultured Chloroflexia bacterium isolate MFD04716.bin.1.117 genome assembly, chromosome: 1 blastn 236 207 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;