RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1126198" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA1126198 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9209563 9209563 PRJNA1126198_P_NODE_38968_length_420_cov_2.997118_g38255_i0 PRJNA1126198 38968 420 2.997118 12.5878956 Crogonang virus 58 3063050 Viruses Viruses 176 2.3e-39   NTclustered gi|2626079542|gb|OR270365.1| 3063050 g38255 i0 80.342 0.557142857142857 234 44 55 2 1 233 233 1 MAG: Crogonang virus 58 isolate CGH03 genomic sequence blastn 234 176 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Crogonang virus 58
23233492 23233492 PRJNA1126198_P_NODE_186199_length_298_cov_0.902222_g185479_i0 PRJNA1126198 186199 298 0.902222 2.68862156 Parecho-like virus 1247839 Viruses Viruses 52.8 0.028   NTclustered gi|2196303787|gb|MZ679274.1| 1247839 g185479 i0 100 0.0939597315436242 28 0 9 0 40 67 6437 6464 MAG: polyprotein gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Parecho-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;