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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA1126198" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 18 ✖

bioproject 1

  • PRJNA1126198 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
281804 281804 PRJNA1126198_P_NODE_479661_length_236_cov_2.460123_g478940_i0 PRJNA1126198 479661 236 2.460123 5.80589028 Lamtostyla gui 2678605 SAR_Eukaryotes SAR_Eukaryotes 399 6.559999999999998e-107   NTclustered gi|1778223994|gb|MN733822.1| 2678605 g478940 i0 97.436 77.4703389830509 234 6 99 0 3 236 4212 3979 Lamtostyla gui isolate LWY2015111409 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18283 399 1 Eukaryota Sar   Ciliophora Spirotrichea Stichotrichida Amphisiellidae Lamtostyla Lamtostyla gui
1556176 1556176 PRJNA1126198_P_NODE_386582_length_250_cov_0.881356_g385861_i0 PRJNA1126198 386582 250 0.881356 2.20339 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.87e-4   NTclustered gi|916416619|ref|XM_013374087.1| 5802 g385861 i0 100 12.06 31 0 12 0 122 152 1158 1188 Eimeria tenella kelch motif domain-containing protein, putative (ETH_00008020), partial mRNA blastn 3015 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
1556344 1556344 PRJNA1126198_P_NODE_451262_length_243_cov_3.729412_g450541_i0 PRJNA1126198 451262 243 3.729412 9.06247116 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 159 1.2499999999999999e-34   NTclustered gi|325195233|emb|FR826028.1| 890382 g450541 i0 97.826 0.378600823045267 92 2 38 0 149 240 176 267 Albugo laibachii Nc14, genomic contig CONTIG_3114_NC14_v4_456_30 blastn 92 159 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
2305646 2305646 PRJNA1126198_P_NODE_300762_length_265_cov_2.223958_g300041_i0 PRJNA1126198 300762 265 2.223958 5.8934887 Bacillariaceae 33852 SAR_Eukaryotes SAR_Eukaryotes 473 4.3599999999999987e-129   NTclustered gi|2127877266|ref|NC_058784.1| 183589 g300041 i0 98.868 196.954716981132 265 3 100 0 1 265 46804 47068 Pseudo-nitzschia multistriata isolate CNS00142 chloroplast, complete genome blastn 52193 473 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Pseudo-nitzschia Pseudo-nitzschia multistriata
4108073 4108073 PRJNA1126198_P_NODE_10464_length_586_cov_14.222222_g9794_i0 PRJNA1126198 10464 586 14.222222 83.34222092 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 171 1.5299999999999998e-37   NTclustered gi|325195233|emb|FR826028.1| 890382 g9794 i0 88.276 0.41296928327645 145 14 24 3 225 367 432 289 Albugo laibachii Nc14, genomic contig CONTIG_3114_NC14_v4_456_30 blastn 242 171 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
6658978 6658978 PRJNA1126198_P_NODE_167686_length_305_cov_1.344828_g166966_i0 PRJNA1126198 167686 305 1.344828 4.1017254 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 302 2.56e-77   NTclustered gi|820695469|tpe|LN714488.1| 572307 g166966 i0 84.478 32.2 335 21 100 9 1 305 300359 300692 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 9821 302 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
7934595 7934595 PRJNA1126198_P_NODE_39607_length_419_cov_1.315029_g38893_i0 PRJNA1126198 39607 419 1.315029 5.50997151 Rimostrombidium veniliae 702563 SAR_Eukaryotes SAR_Eukaryotes 359 2.12e-94   NTclustered gi|759083337|gb|KM221993.1| 702563 g38893 i0 82.27 96.8090692124105 423 67 100 8 1 419 965 547 Rimostrombidium veniliae voucher LWW2007042901 alpha-tubulin gene, partial cds blastn 40563 359 1 Eukaryota Sar   Ciliophora Spirotrichea Choreotrichida Strobilidiidae Rimostrombidium Rimostrombidium veniliae
10485235 10485235 PRJNA1126198_P_NODE_451209_length_243_cov_5.323529_g450488_i0 PRJNA1126198 451209 243 5.323529 12.93617547 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 150 7.55e-32   NTclustered gi|325195233|emb|FR826028.1| 890382 g450488 i0 95.745 0.534979423868313 94 2 38 2 1 93 101 193 Albugo laibachii Nc14, genomic contig CONTIG_3114_NC14_v4_456_30 blastn 130 150 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
11760127 11760127 PRJNA1126198_P_NODE_3690_length_937_cov_3.554398_g3175_i0 PRJNA1126198 3690 937 3.554398 33.30470926 Haslea pseudostrearia 197756 SAR_Eukaryotes SAR_Eukaryotes 158 1.95e-33   NTclustered gi|2328347954|ref|NC_067578.1| 197756 g3175 i0 76.106 26.4525080042689 339 59 35 17 16 347 27587 27910 Haslea pseudostrearia strain SCCAP K-1594 mitochondrion, complete genome blastn 24786 158 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Haslea Haslea pseudostrearia
11760224 11760224 PRJNA1126198_P_NODE_410850_length_247_cov_2.183908_g410129_i0 PRJNA1126198 410850 247 2.183908 5.39425276 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 279 9.41e-71   NTclustered gi|2248513440|ref|NC_063805.1| 4781 g410129 i0 87.917 100.072874493927 240 26 97 3 1 239 2439 2202 Plasmopara halstedii isolate 710 mitochondrion, complete genome blastn 24718 279 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
14310193 14310193 PRJNA1126198_P_NODE_263672_length_274_cov_2.308458_g262951_i0 PRJNA1126198 263672 274 2.308458 6.32517492 Aureococcus anophagefferens 44056 SAR_Eukaryotes SAR_Eukaryotes 204 6.569999999999999e-48   NTclustered gi|676398336|ref|XM_009044198.1| 44056 g262951 i0 81.818 59.7408759124088 242 44 88 0 31 272 281 40 Aureococcus anophagefferens hypothetical protein partial mRNA blastn 16369 204 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Aureococcus Aureococcus anophagefferens
16858714 16858714 PRJNA1126198_P_NODE_362694_length_252_cov_12.754190_g361973_i0 PRJNA1126198 362694 252 12.75419 32.1405588 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 220 5.919999999999999e-53   NTclustered gi|325195233|emb|FR826028.1| 890382 g361973 i0 90.116 0.682539682539683 172 14 67 3 81 250 456 286 Albugo laibachii Nc14, genomic contig CONTIG_3114_NC14_v4_456_30 blastn 172 220 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
19407715 19407715 PRJNA1126198_P_NODE_53936_length_391_cov_4.424528_g53219_i0 PRJNA1126198 53936 391 4.424528 17.29990448 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 255 2.65e-63   NTclustered gi|325194231|emb|FR825088.1| 890382 g53219 i0 92.655 0.872122762148338 177 13 45 0 215 391 7 183 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 341 255 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
20156675 20156675 PRJNA1126198_P_NODE_245316_length_279_cov_1.684466_g244595_i0 PRJNA1126198 245316 279 1.684466 4.69966014 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 494 3.55e-135   NTclustered gi|1803023461|gb|MN937452.1| 2850 g244595 i0 98.566 196.870967741935 279 4 100 0 1 279 68221 68499 Phaeodactylum tricornutum strain ICE-H chloroplast, complete genome blastn 54927 494 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
21957861 21957861 PRJNA1126198_P_NODE_1238_length_1795_cov_19.905343_g1020_i0 PRJNA1126198 1238 1795 19.905343 357.30090685 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 2652 0   NTclustered gi|325194231|emb|FR825088.1| 890382 g1020 i0 97.079 4.44122562674095 1575 45 88 1 1 1574 1575 1 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 7972 2652 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
21958206 21958206 PRJNA1126198_P_NODE_3158_length_1026_cov_21.162644_g2695_i0 PRJNA1126198 3158 1026 21.162644 217.12872744 Colponema vietnamica 1492817 SAR_Eukaryotes SAR_Eukaryotes 797 0   NTclustered gi|677286262|gb|KF997852.1| 1492817 g2695 i0 82.585 70.0038986354776 913 149 88 9 1 908 429 1336 Colponema vietnamica from Viet Nam translation elongation factor 1-alpha (EF1A) mRNA, complete cds blastn 71824 797 1 Eukaryota Sar       Colponemida Colponemidia Colponema Colponema vietnamica
21958218 21958218 PRJNA1126198_P_NODE_321058_length_261_cov_1.345745_g320337_i0 PRJNA1126198 321058 261 1.345745 3.51239445 Aureococcus anophagefferens 44056 SAR_Eukaryotes SAR_Eukaryotes 174 4.87e-39   NTclustered gi|676394522|ref|XM_009042291.1| 44056 g320337 i0 79.231 75.911877394636 260 46 98 7 4 259 585 330 Aureococcus anophagefferens hypothetical protein partial mRNA blastn 19813 174 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Aureococcus Aureococcus anophagefferens
21958409 21958409 PRJNA1126198_P_NODE_404398_length_248_cov_1.314286_g403677_i0 PRJNA1126198 404398 248 1.314286 3.25942928 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 158 4.62e-34   NTclustered gi|675168846|ref|XM_008895060.1| 761204 g403677 i0 79.556 69.0564516129032 225 42 90 4 2 224 245 467 Phytophthora parasitica INRA-310 ubiquitin-60S ribosomal protein L40 mRNA blastn 17126 158 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;