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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA1126198" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 16 ✖

bioproject 1

  • PRJNA1126198 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
281052 281052 PRJNA1126198_P_NODE_10841_length_580_cov_3.315582_g10169_i0 PRJNA1126198 10841 580 3.315582 19.2303756 Acytostelium subglobosum 361139 Evosea other_Eukaryota 202 5.369999999999999e-47   NTclustered gi|831792076|ref|XM_012904471.1| 1410327 g10169 i0 82.627 0.803448275862069 236 33 40 6 292 523 1643 1412 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 466 202 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
281311 281311 PRJNA1126198_P_NODE_253141_length_277_cov_1.519608_g252420_i0 PRJNA1126198 253141 277 1.519608 4.20931416 Entamoeba histolytica 5759 Evosea other_Eukaryota 158 5.25e-34   NTclustered gi|1865795|emb|Y11271.1| 5759 g252420 i0 88.06 4.6028880866426 134 14 48 2 145 277 1093 961 E.histolytica ss1 gene blastn 1275 158 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
281680 281680 PRJNA1126198_P_NODE_438701_length_245_cov_0.901163_g437980_i0 PRJNA1126198 438701 245 0.901163 2.20784935 Heterostelium album 2086695 Evosea other_Eukaryota 62.1 3.67e-5   NTclustered gi|1160570722|ref|XM_020574855.1| 670386 g437980 i0 100 13.1469387755102 33 0 13 0 138 170 3176 3144 Polysphondylium pallidum PN500 DNA polymerase zeta catalytic subunit (polZ), partial mRNA blastn 3221 62.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
281738 281738 PRJNA1126198_P_NODE_458381_length_243_cov_0.917647_g457660_i0 PRJNA1126198 458381 243 0.917647 2.22988221 Acytostelium subglobosum 361139 Evosea other_Eukaryota 52.8 0.022   NTclustered gi|831753239|ref|XM_012892301.1| 1410327 g457660 i0 100 0.11522633744856 28 0 12 0 215 242 1330 1303 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
1556428 1556428 PRJNA1126198_P_NODE_488282_length_229_cov_5.576923_g487561_i0 PRJNA1126198 488282 229 5.576923 12.77115367 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 422 1.35e-113   NTclustered gi|909719645|gb|KT185625.1| 5778 g487561 i0 100 3.14410480349345 228 0 99 0 2 229 6317 6090 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 720 422 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
6659008 6659008 PRJNA1126198_P_NODE_191586_length_295_cov_3.058559_g190866_i0 PRJNA1126198 191586 295 3.058559 9.02274905 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 108 5.76e-19   NTclustered gi|470458637|ref|XM_004341224.1| 1257118 g190866 i0 95.522 0.430508474576271 67 3 43 0 19 85 1611 1545 Acanthamoeba castellanii str. Neff Flavinbinding monooxygenase-like subfamily protein (ACA1_262350), partial mRNA blastn 127 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7934049 7934049 PRJNA1126198_P_NODE_119527_length_329_cov_2.214844_g118808_i0 PRJNA1126198 119527 329 2.214844 7.28683676 Thecamoeba foliovenanda 2653195 Discosea other_Eukaryota 603 6.819999999999999e-168   NTclustered gi|1758284524|gb|MN544291.1| 2653195 g118808 i0 99.697 44.7629179331307 330 0 100 1 1 329 590 919 Thecamoeba foliovenanda strain Ta68 small subunit ribosomal RNA gene, partial sequence blastn 14727 603 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba foliovenanda
9209205 9209205 PRJNA1126198_P_NODE_2228_length_1255_cov_3.491540_g1849_i0 PRJNA1126198 2228 1255 3.49154 43.818827 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 942 0   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g1849 i0 80.614 63.6326693227092 1238 224 98 14 1 1230 184 1413 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 79859 942 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9209895 9209895 PRJNA1126198_P_NODE_86188_length_354_cov_1.103203_g85470_i0 PRJNA1126198 86188 354 1.103203 3.90533862 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 276 1.83e-69   NTclustered gi|470521902|ref|XM_004353878.1| 1257118 g85470 i0 81.006 86.4237288135593 358 58 99 9 1 353 1507 1859 Acanthamoeba castellanii str. Neff integral membrane protein 1 isoform 5, putative (ACA1_169070), partial mRNA blastn 30594 276 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13035497 13035497 PRJNA1126198_P_NODE_471651_length_242_cov_0.911243_g470930_i0 PRJNA1126198 471651 242 0.911243 2.20520806 Entamoeba dispar 46681 Evosea other_Eukaryota 161 3.47e-35   NTclustered gi|167381393|ref|XM_001735644.1| 370354 g470930 i0 80.18 0.91735537190082606 222 38 90 6 22 240 804 586 Entamoeba dispar SAW760 uncharacterized protein (EDI_025790), partial mRNA blastn 222 161 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
14310717 14310717 PRJNA1126198_P_NODE_494812_length_210_cov_4.218978_g494090_i0 PRJNA1126198 494812 210 4.218978 8.8598538 Thecamoeba foliovenanda 2653195 Discosea other_Eukaryota 388 1.24e-103   NTclustered gi|1758284524|gb|MN544291.1| 2653195 g494090 i0 100 30.7238095238095 210 0 100 0 1 210 1314 1105 Thecamoeba foliovenanda strain Ta68 small subunit ribosomal RNA gene, partial sequence blastn 6452 388 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba foliovenanda
18881741 18881741 PRJNA1126198_P_NODE_15595_length_524_cov_13.771619_g14910_i0 PRJNA1126198 15595 524 13.771619 72.16328356 Vannellidae 95227 Discosea other_Eukaryota 797 0   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g14910 i0 94.14 100.81106870229 529 21 100 9 1 524 1693 1170 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 52825 802 0.993765586034913 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
19406964 19406964 PRJNA1126198_P_NODE_13496_length_545_cov_5.527542_g12815_i0 PRJNA1126198 13496 545 5.527542 30.1251039 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 231 6.41e-56   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g12815 i0 80.464 55.0990825688073 302 59 55 0 103 404 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30029 231 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20156695 20156695 PRJNA1126198_P_NODE_265836_length_274_cov_1.373134_g265115_i0 PRJNA1126198 265836 274 1.373134 3.76238716 Entamoeba 5758 Evosea other_Eukaryota 189 1.84e-43   NTclustered gi|807611|gb|L36807.1|ENHRGS 5759 g265115 i0 98.148 38.7408759124088 108 2 39 0 1 108 3059 2952 Entamoeba histolytica strain HK9 17S ribosomal RNA (17S rRNA) gene, partial sequence blastn 10615 189 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
22707139 22707139 PRJNA1126198_P_NODE_179418_length_300_cov_1.687225_g178698_i0 PRJNA1126198 179418 300 1.687225 5.061675 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 555 1.7399999999999995e-153   NTclustered gi|300078496|gb|GU001158.1| 5778 g178698 i0 100 91.5166666666667 300 0 100 0 1 300 1221 922 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 27455 555 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
23982782 23982782 PRJNA1126198_P_NODE_491359_length_227_cov_3.967532_g490637_i0 PRJNA1126198 491359 227 3.967532 9.00629764 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 420 4.81e-113   NTclustered gi|399764177|gb|JQ271688.1| 5778 g490637 i0 100 100 227 0 100 0 1 227 152 378 Hartmannella vermiformis strain ECH26 18S ribosomal RNA gene, partial sequence blastn 22700 420 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;