RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1123436" and tax_phylum = "Microsporidia"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1123436 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11759130 11759130 PRJNA1123436_P_NODE_84870_length_269_cov_1.178571_g83656_i0 PRJNA1123436 84870 269 1.178571 3.17035599 Ordospora pajunii 3039483 Fungi Fungi 161 3.92e-35   NTclustered gi|2607439339|ref|XM_060421342.1| 3039483 g83656 i0 79.325 1.77323420074349 237 43 87 6 1 234 1149 1382 Ordospora pajunii MCMP-loop domain-containing protein (HK407_09g13800), partial mRNA blastn 477 161 1 Eukaryota Opisthokonta Fungi Microsporidia     Ordosporidae Ordospora Ordospora pajunii
16856771 16856771 PRJNA1123436_P_NODE_32234_length_450_cov_5.323607_g31022_i0 PRJNA1123436 32234 450 5.323607 23.9562315 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 436 1.03e-117   NTclustered gi|2522768008|gb|OR162445.1| 646526 g31022 i0 84.361 7.18 454 61 99 10 1 448 1754 2203 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3231 436 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
19406367 19406367 PRJNA1123436_P_NODE_8156_length_1031_cov_5.503132_g7188_i0 PRJNA1123436 8156 1031 5.503132 56.73729092 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 516 3.09e-141   NTclustered gi|2522768008|gb|OR162445.1| 646526 g7188 i0 86.214 13.3171677982541 486 56 87 10 215 695 2533 3012 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13730 516 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
21431760 21431760 PRJNA1123436_P_NODE_7057_length_1127_cov_4.055028_g6158_i0 PRJNA1123436 7057 1127 4.055028 45.70016556 Ecytonucleospora 3078583 Fungi Fungi 1410 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g6158 i0 89.349 96.0834072759539 1136 102 99 15 4 1127 1142 14 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 108286 1410 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;