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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1123436" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1123436 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
280086 280086 PRJNA1123436_P_NODE_60121_length_321_cov_56.995968_g58907_i0 PRJNA1123436 60121 321 56.995968 182.95705728 Fibrobacterota bacterium 2052160 Bacteria Bacteria 267 9.88e-67   NTclustered gi|1958056460|gb|CP064986.1| 2052160 g58907 i0 97.436 76.3426791277259 156 4 92 0 3 158 2982697 2982852 Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome blastn 24506 267 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
1554696 1554696 PRJNA1123436_P_NODE_60122_length_321_cov_56.717742_g58908_i0 PRJNA1123436 60122 321 56.717742 182.06395182 Fibrobacterota bacterium 2052160 Bacteria Bacteria 267 9.88e-67   NTclustered gi|1958056460|gb|CP064986.1| 2052160 g58908 i0 97.436 75.6666666666667 156 4 92 0 164 319 2982852 2982697 Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome blastn 24289 267 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
15582852 15582852 PRJNA1123436_P_NODE_57573_length_328_cov_83.227451_g56359_i0 PRJNA1123436 57573 328 83.227451 272.98603928 Fibrobacterota bacterium 2052160 Bacteria Bacteria 267 1.01e-66   NTclustered gi|1958056460|gb|CP064986.1| 2052160 g56359 i0 97.436 79.2774390243902 156 4 93 0 171 326 2982852 2982697 Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome blastn 26003 267 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
15582880 15582880 PRJNA1123436_P_NODE_59053_length_324_cov_141.354582_g57839_i0 PRJNA1123436 59053 324 141.354582 457.98884568 Fibrobacterota bacterium 2052160 Bacteria Bacteria 250 1.01e-61   NTclustered gi|1958056460|gb|CP064986.1| 2052160 g57839 i0 96.078 78.1543209876543 153 6 90 0 14 166 2062342 2062190 Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome blastn 25322 250 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
18132013 18132013 PRJNA1123436_P_NODE_71455_length_294_cov_162.556561_g70241_i0 PRJNA1123436 71455 294 162.556561 477.91628934 Fibrobacterota bacterium 2052160 Bacteria Bacteria 224 5.459999999999999e-54   NTclustered gi|1958056460|gb|CP064986.1| 2052160 g70241 i0 95.714 60.9489795918367 140 4 95 2 154 292 2062074 2061936 Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome blastn 17919 224 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;