RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1123436" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1123436 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6658633 6658633 PRJNA1123436_P_NODE_96986_length_251_cov_0.865169_g95772_i0 PRJNA1123436 96986 251 0.865169 2.17157419 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 209 1.28e-49   NTclustered gi|2874253756|emb|OY969696.1| 2052149 g95772 i0 84.186 1.67729083665339 215 34 86 0 36 250 4183410 4183624 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.14 genome assembly, chromosome: 1 blastn 421 209 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
14307955 14307955 PRJNA1123436_P_NODE_119152_length_243_cov_1.600000_g117938_i0 PRJNA1123436 119152 243 1.6 3.888 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 274 4.29e-69   NTclustered gi|2874253756|emb|OY969696.1| 2052149 g117938 i0 87.137 5.86008230452675 241 31 99 0 1 241 1652275 1652515 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.14 genome assembly, chromosome: 1 blastn 1424 274 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
14307967 14307967 PRJNA1123436_P_NODE_120112_length_243_cov_0.905882_g118898_i0 PRJNA1123436 120112 243 0.905882 2.20129326 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 305 1.52e-78   NTclustered gi|2874253756|emb|OY969696.1| 2052149 g118898 i0 89.3 1.99588477366255 243 26 100 0 1 243 631842 632084 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.14 genome assembly, chromosome: 1 blastn 485 305 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
16856135 16856135 PRJNA1123436_P_NODE_111114_length_246_cov_0.890173_g109900_i0 PRJNA1123436 111114 246 0.890173 2.18982558 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 235 2.06e-57   NTclustered gi|2874253756|emb|OY969696.1| 2052149 g109900 i0 86.73 0.857723577235772 211 28 86 0 1 211 2532750 2532960 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.14 genome assembly, chromosome: 1 blastn 211 235 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
19405340 19405340 PRJNA1123436_P_NODE_26916_length_499_cov_1.100939_g25708_i0 PRJNA1123436 26916 499 1.100939 5.49368561 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 438 3.2e-118   NTclustered gi|2874253936|emb|OY970261.1| 2052149 g25708 i0 82.927 0.985971943887776 492 78 98 4 10 498 1850389 1849901 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.29 genome assembly, chromosome: 1 blastn 492 438 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
20682269 20682269 PRJNA1123436_P_NODE_96697_length_251_cov_0.865169_g95483_i0 PRJNA1123436 96697 251 0.865169 2.17157419 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 108 4.79e-19   NTclustered gi|2874253778|emb|OY969762.1| 2052149 g95483 i0 83.478 2.40239043824701 115 19 46 0 132 246 2163902 2164016 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.c.1 genome assembly, chromosome: 1 blastn 603 108 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;