contig_metadata
4 rows where analysis = "blastn", bioproject = "PRJNA1123309" and tax_phylum = "Platyhelminthes"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 278103 | 278103 | PRJNA1123309_P_NODE_15181_length_396_cov_2.114551_g14802_i0 | PRJNA1123309 | 15181 | 396 | 2.114551 | 8.37362196 | Schmidtea mediterranea | 79327 | Platyhelminthes | Platyhelminthes | 693 | 0 | NTclustered | gi|753176482|gb|KM821047.2| | 79327 | g14802 | i0 | 100 | 19.4141414141414 | 375 | 0 | 95 | 0 | 1 | 375 | 13322 | 12948 | Schmidtea mediterranea mitochondrion, complete genome | blastn | 7688 | 693 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Rhabditophora | Tricladida | Dugesiidae | Schmidtea | Schmidtea mediterranea | |
| 7931484 | 7931484 | PRJNA1123309_P_NODE_55447_length_248_cov_0.891429_g55067_i0 | PRJNA1123309 | 55447 | 248 | 0.891429 | 2.21074392 | Schmidtea mediterranea | 79327 | Platyhelminthes | Platyhelminthes | 340 | 4.27e-89 | NTclustered | gi|21307911|gb|AY067278.1| | 79327 | g55067 | i0 | 93.636 | 0.887096774193548 | 220 | 12 | 88 | 2 | 2 | 219 | 420 | 639 | Schmidtea mediterranea clone hsp70 unknown mRNA sequence | blastn | 220 | 340 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Rhabditophora | Tricladida | Dugesiidae | Schmidtea | Schmidtea mediterranea | |
| 18130250 | 18130250 | PRJNA1123309_P_NODE_52375_length_250_cov_0.881356_g51995_i0 | PRJNA1123309 | 52375 | 250 | 0.881356 | 2.20339 | Schmidtea mediterranea | 79327 | Platyhelminthes | Platyhelminthes | 267 | 7.43e-67 | NTclustered | gi|1122821607|gb|AY067141.2| | 79327 | g51995 | i0 | 100 | 0.576 | 144 | 0 | 58 | 0 | 17 | 160 | 425 | 282 | Schmidtea mediterranea clone HB.19.4g unknown mRNA sequence | blastn | 144 | 267 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Rhabditophora | Tricladida | Dugesiidae | Schmidtea | Schmidtea mediterranea | |
| 24504407 | 24504407 | PRJNA1123309_P_NODE_49700_length_252_cov_0.871508_g49320_i0 | PRJNA1123309 | 49700 | 252 | 0.871508 | 2.19620016 | Schmidtea mediterranea | 79327 | Platyhelminthes | Platyhelminthes | 342 | 1.21e-89 | NTclustered | gi|21308966|gb|AY068333.1| | 79327 | g49320 | i0 | 97.938 | 0.76984126984127 | 194 | 4 | 77 | 0 | 59 | 252 | 45 | 238 | Schmidtea mediterranea clone H.31.6e(T3) unknown mRNA sequence | blastn | 194 | 342 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Rhabditophora | Tricladida | Dugesiidae | Schmidtea | Schmidtea mediterranea |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;