RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1123309" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1123309 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14306987 14306987 PRJNA1123309_P_NODE_19752_length_355_cov_2.400709_g19373_i0 PRJNA1123309 19752 355 2.400709 8.52251695 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 231 4.02e-56   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g19373 i0 80.122 345.850704225352 327 51 90 13 27 346 160502 160821 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 122777 231 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
21954837 21954837 PRJNA1123309_P_NODE_15838_length_389_cov_2.781646_g15459_i0 PRJNA1123309 15838 389 2.781646 10.82060294 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 265 4.39e-66   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g15459 i0 79.841 183.172236503856 377 65 95 10 9 379 160823 160452 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 71254 265 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;