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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1122875" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA1122875 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
277524 277524 PRJNA1122875_P_NODE_17641_length_397_cov_2.432099_g17417_i0 PRJNA1122875 17641 397 2.432099 9.65543303 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 346 1.56e-90   NTclustered gi|2119445972|ref|XM_044696561.1| 51637 g17417 i0 83.289 95.6826196473552 377 61 95 2 1 376 376 1 Naegleria lovaniensis uncharacterized protein (C9374_006675), partial mRNA blastn 37986 346 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
4104703 4104703 PRJNA1122875_P_NODE_31164_length_292_cov_1.840183_g30940_i0 PRJNA1122875 31164 292 1.840183 5.37333436 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 250 8.94e-62   NTclustered gi|290998588|ref|XM_002681817.1| 5762 g30940 i0 83.704 0.924657534246575 270 38 91 3 26 292 674 408 Naegleria gruberi uncharacterized protein (FM164), mRNA blastn 270 250 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6655252 6655252 PRJNA1122875_P_NODE_11606_length_488_cov_7.156627_g11384_i0 PRJNA1122875 11606 488 7.156627 34.92433976 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 187 1.2499999999999997e-42   NTclustered gi|290975281|ref|XM_002670326.1| 5762 g11384 i0 81.579 12.2008196721311 228 40 47 2 137 363 311 85 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82817), mRNA blastn 5954 187 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10481394 10481394 PRJNA1122875_P_NODE_41909_length_255_cov_1.247253_g41685_i0 PRJNA1122875 41909 255 1.247253 3.18049515 Paravahlkampfia ustiana 166958 Heterolobosea other_Eukaryota 472 1.5e-128   NTclustered gi|1121487417|gb|KX068999.1| 166958 g41685 i0 100 63.8470588235294 255 0 100 0 1 255 866 1120 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 16281 472 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana
11755978 11755978 PRJNA1122875_P_NODE_1650_length_1025_cov_2.428571_g1528_i0 PRJNA1122875 1650 1025 2.428571 24.89285275 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 141 2.16e-28   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g1528 i0 87.603 13.9170731707317 121 15 27 0 630 750 4131 4251 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14265 141 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
13031161 13031161 PRJNA1122875_P_NODE_18131_length_392_cov_1.181818_g17907_i0 PRJNA1122875 18131 392 1.181818 4.63272656 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 195 5.89e-45   NTclustered gi|291000103|ref|XM_002682573.1| 5762 g17907 i0 77.381 21.9770408163265 336 71 85 4 55 387 1961 1628 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_29544), partial mRNA blastn 8615 195 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18129117 18129117 PRJNA1122875_P_NODE_11535_length_490_cov_1.652278_g11313_i0 PRJNA1122875 11535 490 1.652278 8.0961622 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 54.7 0.013   NTclustered gi|2031949428|emb|OD958865.1| 5763 g11313 i0 100 0.0591836734693878 29 0 6 0 100 128 6447 6419 Naegleria fowleri Karachi_NF001 strain blastn 29 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
18129444 18129444 PRJNA1122875_P_NODE_37075_length_272_cov_3.407035_g36851_i0 PRJNA1122875 37075 272 3.407035 9.2671352 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 171 6.599999999999999e-38   NTclustered gi|2124390888|ref|XM_044710315.1| 5763 g36851 i0 87.248 3.75735294117647 149 19 55 0 36 184 200 52 Naegleria fowleri uncharacterized protein (FDP41_006657), partial mRNA blastn 1022 171 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
20679058 20679058 PRJNA1122875_P_NODE_29697_length_300_cov_2.035242_g29473_i0 PRJNA1122875 29697 300 2.035242 6.105726 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 207 5.63e-49   NTclustered gi|290991601|ref|XM_002678378.1| 5762 g29473 i0 79.866 3.48666666666667 298 48 97 11 9 300 453 162 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36356), partial mRNA blastn 1046 207 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21954328 21954328 PRJNA1122875_P_NODE_23378_length_344_cov_5.867159_g23154_i0 PRJNA1122875 23378 344 5.867159 20.18302696 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 200 1.1e-46   NTclustered gi|2031921538|emb|OD955557.1| 5763 g23154 i0 82.008 34.7645348837209 239 39 69 3 3 239 7245 7009 Naegleria fowleri Karachi_NF001 strain blastn 11959 200 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
23229999 23229999 PRJNA1122875_P_NODE_37059_length_273_cov_0.950000_g36835_i0 PRJNA1122875 37059 273 0.95 2.5935 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 128 4.05e-25   NTclustered gi|2119427203|ref|XM_044688271.1| 51637 g36835 i0 81.287 2.50549450549451 171 21 61 11 1 166 277 441 Naegleria lovaniensis uncharacterized protein (C9374_001250), partial mRNA blastn 684 128 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;