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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA1122875" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA1122875 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
277457 277457 PRJNA1122875_P_NODE_12041_length_479_cov_2.709360_g11818_i0 PRJNA1122875 12041 479 2.70936 12.9778344 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 678 0   NTclustered gi|659103927|gb|KJ569727.1| 1512276 g11818 i0 91.935 54.0125260960334 496 23 100 11 1 479 1514 2009 Cochliopodium kieliense clone 9611 18S ribosomal RNA gene, partial sequence blastn 25872 678 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
277847 277847 PRJNA1122875_P_NODE_45901_length_248_cov_2.200000_g45677_i0 PRJNA1122875 45901 248 2.2 5.456 Paramoeba branchiphila 308475 Discosea other_Eukaryota 220 5.81e-53   NTclustered gi|226347442|gb|FJ807261.1| 308475 g45677 i0 82.927 58.5725806451613 246 40 99 2 1 245 333 577 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 14526 220 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
1551992 1551992 PRJNA1122875_P_NODE_1242_length_1127_cov_39.802657_g1137_i0 PRJNA1122875 1242 1127 39.802657 448.57594439 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 706 0   NTclustered gi|470437282|ref|XM_004338924.1| 1257118 g1137 i0 80.921 78.1020408163265 912 159 80 15 62 964 37 942 Acanthamoeba castellanii str. Neff adenine nucleotide translocator, putative (ACA1_128450), partial mRNA blastn 88021 706 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1552041 1552041 PRJNA1122875_P_NODE_16622_length_410_cov_1.412463_g16398_i0 PRJNA1122875 16622 410 1.412463 5.7910983 Vannella sp. strain W181G/I 325084 Discosea other_Eukaryota 658 0   NTclustered gi|62865938|gb|AY929913.1| 325084 g16398 i0 95.642 102.753658536585 413 12 100 6 1 410 631 1040 Vannella sp. strain W181G/I 18S small subunit ribosomal RNA gene, partial sequence blastn 42129 658 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain W181G/I
6655830 6655830 PRJNA1122875_P_NODE_846_length_1269_cov_1.703177_g764_i0 PRJNA1122875 846 1269 1.703177 21.61331613 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 1877 0   NTclustered gi|659103926|gb|KJ569726.1| 1512276 g764 i0 93.579 59.371158392435 1277 53 99 25 9 1267 4 1269 Cochliopodium kieliense clone 9605 18S ribosomal RNA gene, partial sequence blastn 75342 1877 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
9205501 9205501 PRJNA1122875_P_NODE_19448_length_378_cov_1.580328_g19224_i0 PRJNA1122875 19448 378 1.580328 5.97363984 Korotnevella jeppesenii 1678066 Discosea other_Eukaryota 671 0   NTclustered gi|861553759|gb|KP719186.1| 1678066 g19224 i0 98.681 76.8888888888889 379 4 100 1 1 378 1207 829 Korotnevella jeppesenii strain A4DVDPB clone 4 small subunit ribosomal RNA gene, partial sequence blastn 29064 671 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella jeppesenii
10481151 10481151 PRJNA1122875_P_NODE_2049_length_959_cov_5.927765_g1908_i0 PRJNA1122875 2049 959 5.927765 56.84726635 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 405 6.47e-108   NTclustered gi|470460221|ref|XM_004341389.1| 1257118 g1908 i0 76.829 72.4546402502607 738 160 76 10 7 738 1 733 Acanthamoeba castellanii str. Neff ribosomal proteins l2, RNA binding domain containing protein (ACA1_265570), partial mRNA blastn 69484 405 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13031069 13031069 PRJNA1122875_P_NODE_10931_length_502_cov_9.093240_g10710_i0 PRJNA1122875 10931 502 9.09324 45.6480648 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 217 1.64e-51   NTclustered gi|470490984|ref|XM_004345790.1| 1257118 g10710 i0 81.783 11.9780876494024 258 47 51 0 177 434 258 1 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_181970), partial mRNA blastn 6013 217 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14306641 14306641 PRJNA1122875_P_NODE_4272_length_744_cov_2.703428_g4074_i0 PRJNA1122875 4272 744 2.703428 20.11350432 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 337 1.8399999999999992e-87   NTclustered gi|470371714|ref|XM_004332823.1| 1257118 g4074 i0 85.625 28.9744623655914 320 46 43 0 425 744 1270 951 Acanthamoeba castellanii str. Neff nucleolar protein Nop56, putative (ACA1_180800), partial mRNA blastn 21557 337 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15580354 15580354 PRJNA1122875_P_NODE_2033_length_961_cov_5.004505_g1892_i0 PRJNA1122875 2033 961 5.004505 48.09329305 Paramoeba branchiphila 308475 Discosea other_Eukaryota 922 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g1892 i0 86.659 66.4536940686785 832 109 86 2 121 951 1202 372 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 63862 922 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
15580573 15580573 PRJNA1122875_P_NODE_39433_length_264_cov_1.612565_g39209_i0 PRJNA1122875 39433 264 1.612565 4.2571716 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 73.1 1.85e-8   NTclustered gi|470419730|ref|XM_004337175.1| 1257118 g39209 i0 100 10.5984848484848 39 0 15 0 1 39 306 268 Acanthamoeba castellanii str. Neff nucleoside diphosphate kinase 1, putative (ACA1_218640), partial mRNA blastn 2798 73.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16855007 16855007 PRJNA1122875_P_NODE_42774_length_251_cov_2.213483_g42550_i0 PRJNA1122875 42774 251 2.213483 5.55584233 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 134 7.9e-27   NTclustered gi|470455615|ref|XM_004340928.1| 1257118 g42550 i0 86.29 0.49402390438247 124 15 49 2 1 123 225 103 Acanthamoeba castellanii str. Neff ribosomal protein S23 (S12), putative (ACA1_232480), partial mRNA blastn 124 134 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18129176 18129176 PRJNA1122875_P_NODE_15335_length_426_cov_1.974504_g15111_i0 PRJNA1122875 15335 426 1.974504 8.41138704 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 305 2.85e-78   NTclustered gi|470416430|ref|XM_004336836.1| 1257118 g15111 i0 80.529 88.9671361502347 416 65 96 11 2 409 705 298 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_130960), partial mRNA blastn 37900 305 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18129613 18129613 PRJNA1122875_P_NODE_4995_length_700_cov_2.639553_g4786_i0 PRJNA1122875 4995 700 2.639553 18.476871 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 379 2.82e-100   NTclustered gi|470380222|ref|XM_004333620.1| 1257118 g4786 i0 81.466 59.9528571428571 464 84 66 2 181 643 474 12 Acanthamoeba castellanii str. Neff ran, putative (ACA1_260190), partial mRNA blastn 41967 379 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18129744 18129744 PRJNA1122875_P_NODE_9455_length_536_cov_1.533477_g9236_i0 PRJNA1122875 9455 536 1.533477 8.21943672 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 224 1.05e-53   NTclustered gi|470454701|ref|XM_004340818.1| 1257118 g9236 i0 80.268 2.75746268656716 299 57 56 2 137 434 79 376 Acanthamoeba castellanii str. Neff ribosomal protein S12, putative (ACA1_151230), partial mRNA blastn 1478 224 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23230183 23230183 PRJNA1122875_P_NODE_5019_length_699_cov_2.595847_g4810_i0 PRJNA1122875 5019 699 2.595847 18.14497053 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 388 4.679999999999998e-103   NTclustered gi|342850757|gb|JF262539.1| 180228 g4810 i0 78.483 67.6981402002861 567 120 81 2 126 691 761 196 Neoparamoeba pemaquidensis culture-collection CCAP:1560/4 elongation factor 2 mRNA, partial cds blastn 47321 388 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
24503460 24503460 PRJNA1122875_P_NODE_2380_length_915_cov_3.983373_g2224_i0 PRJNA1122875 2380 915 3.983373 36.44786295 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 54.7 0.026   NTclustered gi|470517125|ref|XM_004353115.1| 1257118 g2224 i0 100 0.0316939890710383 29 0 3 0 543 571 801 773 Acanthamoeba castellanii str. Neff glycerol kinase (ACA1_072720), partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;