RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1122875" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1122875 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4104766 4104766 PRJNA1122875_P_NODE_36544_length_274_cov_1.940299_g36320_i0 PRJNA1122875 36544 274 1.940299 5.31641926 Candidatus Chlorohelix allophototropha 3003348 Bacteria Bacteria 52.8 0.025   NTclustered gi|2530748470|gb|CP128399.1| 3003348 g36320 i0 100 0.102189781021898 28 0 10 0 133 160 2729585 2729558 Candidatus Chlorohelix allophototropha isolate L227-S17 chromosome 1, complete sequence blastn 28 52.8 1 Bacteria   Bacillati Chloroflexota Chloroflexia Candidatus Chloroheliales Candidatus Chloroheliaceae Candidatus Chlorohelix Candidatus Chlorohelix allophototropha
4856853 4856853 PRJNA1122875_P_NODE_804_length_1284_cov_2.706854_g724_i0 PRJNA1122875 804 1284 2.706854 34.75600536 root 1 Root_unresolved Root_unresolved 496 5.05e-135   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g724 i0 75.155 40.6783489096573 1127 227 85 38 145 1237 938611 939718 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 52231 497 0.997987927565392 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
10481388 10481388 PRJNA1122875_P_NODE_41089_length_258_cov_1.302703_g40865_i0 PRJNA1122875 41089 258 1.302703 3.36097374 Anaerolineales bacterium 2073117 Bacteria Bacteria 56.5 0.002   NTclustered gi|2076445013|gb|CP075367.1| 2073117 g40865 i0 100 0.441860465116279 30 0 12 0 35 64 79288 79259 MAG: Anaerolineales bacterium isolate ACE_CHL1 chromosome blastn 114 56.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
10481395 10481395 PRJNA1122875_P_NODE_42289_length_253_cov_1.838889_g42065_i0 PRJNA1122875 42289 253 1.838889 4.65238917 Chloroflexota bacterium 2026724 Bacteria Bacteria 54.7 0.006   NTclustered gi|2621702192|emb|OY760183.1| 2026724 g42065 i0 92.105 0.150197628458498 38 3 15 0 82 119 88629 88592 MAG: Chloroflexota bacterium isolate 1e5240b1-722b-4dd6-bc08-6f4f73fd4587 genome assembly, chromosome: 1 blastn 38 54.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
14306520 14306520 PRJNA1122875_P_NODE_3212_length_828_cov_2.871523_g3030_i0 PRJNA1122875 3212 828 2.871523 23.77621044 Tepidiforma bonchosmolovskayae 2601677 Bacteria Bacteria 329 3.44e-85   NTclustered gi|1756502384|gb|CP042829.1| 2601677 g3030 i0 78.723 19.4903381642512 517 93 62 14 80 590 946275 945770 Tepidiforma bonchosmolovskayae strain 3753O chromosome, complete genome blastn 16138 329 1 Bacteria   Bacillati Chloroflexota Tepidiformia Tepidiformales Tepidiformaceae Tepidiforma Tepidiforma bonchosmolovskayae
15580471 15580471 PRJNA1122875_P_NODE_29393_length_302_cov_1.650655_g29169_i0 PRJNA1122875 29393 302 1.650655 4.9849781 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 246 1.2e-60   NTclustered gi|2621704692|emb|OY762063.1| 2026734 g29169 i0 86.147 56.7119205298013 231 28 76 2 1 229 1369100 1368872 MAG: Dehalococcoidia bacterium isolate 5405c63e-44e1-4988-9b68-fe709a885d54 genome assembly, chromosome: 1 blastn 17127 246 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
20679081 20679081 PRJNA1122875_P_NODE_3197_length_830_cov_2.931308_g3016_i0 PRJNA1122875 3197 830 2.931308 24.3298564 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 54.7 0.023   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g3016 i0 100 0.0349397590361446 29 0 3 0 473 501 1614483 1614455 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 29 54.7 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
23230233 23230233 PRJNA1122875_P_NODE_54419_length_233_cov_2.362500_g54195_i0 PRJNA1122875 54419 233 2.3625 5.504625 Caldilineaceae bacterium 2614250 Bacteria Bacteria 76.8 1.24e-9   NTclustered gi|2621703348|emb|OY760647.1| 2614250 g54195 i0 91.228 3.72961373390558 57 3 24 2 83 138 2816913 2816968 MAG: Caldilineaceae bacterium isolate dd18155e-cfc5-4d95-bdad-01b25ac4382b genome assembly, chromosome: 1 blastn 869 76.8 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;