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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1122875" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA1122875 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
277943 277943 PRJNA1122875_P_NODE_5261_length_685_cov_3.302288_g5051_i0 PRJNA1122875 5261 685 3.302288 22.6206728 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 737 0   NTclustered gi|238617630|gb|FJ973394.1| 188950 g5051 i0 89.775 92.2116788321168 577 57 84 2 108 683 837 262 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 63165 737 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5381095 5381095 PRJNA1122875_P_NODE_645_length_1362_cov_16.411947_g573_i0 PRJNA1122875 645 1362 16.411947 223.53071814 Paulinella chromatophora 39717 SAR_Eukaryotes SAR_Eukaryotes 701 0   NTclustered gi|302563026|dbj|AB546336.1| 39717 g573 i0 78.19 48.3458149779736 1160 207 84 34 1 1141 141 1273 Paulinella chromatophora EF-1a mRNA for elongation factor 1alpha, partial cds blastn 65847 701 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella chromatophora
6131593 6131593 PRJNA1122875_P_NODE_23225_length_346_cov_1.142857_g23001_i0 PRJNA1122875 23225 346 1.142857 3.95428522 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 167 1.12e-36   NTclustered gi|290760486|gb|GQ144689.1| 361427 g23001 i0 96.97 35.1647398843931 99 3 58 0 248 346 2785 2883 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 12167 167 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
15580460 15580460 PRJNA1122875_P_NODE_28353_length_309_cov_0.906780_g28129_i0 PRJNA1122875 28353 309 0.90678 2.8019502 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 329 1.1899999999999998e-85   NTclustered gi|300676750|gb|GQ377668.1| 45107 g28129 i0 86.824 82.9385113268608 296 37 95 2 1 295 968 674 Heteromita globosa actin gene, partial cds blastn 25628 329 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
15580678 15580678 PRJNA1122875_P_NODE_48033_length_246_cov_1.780347_g47809_i0 PRJNA1122875 48033 246 1.780347 4.37965362 Paulinella micropora 1928728 SAR_Eukaryotes SAR_Eukaryotes 246 9.5e-61   NTclustered gi|1389527545|dbj|LC383945.1| 1928728 g47809 i0 90.426 73.0569105691057 188 17 76 1 60 246 234 421 Paulinella micropora gene for actin, complete cds blastn 17972 246 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella micropora
18129218 18129218 PRJNA1122875_P_NODE_1955_length_973_cov_3.765556_g1815_i0 PRJNA1122875 1955 973 3.765556 36.63885988 Proleptomonas faecicola 149084 SAR_Eukaryotes SAR_Eukaryotes 865 0   NTclustered gi|302026150|gb|GQ377654.1| 149084 g1815 i0 88.624 75.3812949640288 712 79 73 2 2 712 491 1201 Proleptomonas faecicola beta-tubulin (Btub) gene, partial cds blastn 73346 865 1 Eukaryota Sar   Cercozoa   Glissomonadida   Proleptomonas Proleptomonas faecicola
18129225 18129225 PRJNA1122875_P_NODE_19895_length_373_cov_10.850000_g19671_i0 PRJNA1122875 19895 373 10.85 40.4705 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 418 3.039999999999999e-112   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g19671 i0 87.433 55.2144772117962 374 33 100 7 1 373 3662 4022 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 20595 418 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
20155043 20155043 PRJNA1122875_P_NODE_15896_length_418_cov_2.866667_g15672_i0 PRJNA1122875 15896 418 2.866667 11.98266806 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 614 4.089999999999999e-171   NTclustered gi|238617605|gb|FJ973380.1| 45107 g15672 i0 93.112 101.442583732057 421 25 100 4 1 418 2152 2571 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 42403 614 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
20679015 20679015 PRJNA1122875_P_NODE_26157_length_323_cov_5.128000_g25933_i0 PRJNA1122875 26157 323 5.128 16.56344 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 303 7.58e-78   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g25933 i0 92.857 61.1269349845201 210 13 65 2 1 209 3658 3866 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 19744 303 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
23230268 23230268 PRJNA1122875_P_NODE_7899_length_579_cov_2.300395_g7681_i0 PRJNA1122875 7899 579 2.300395 13.31928705 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 407 1.06e-108   NTclustered gi|238617636|gb|FJ973397.1| 45107 g7681 i0 86.885 64.5993091537133 366 44 63 3 15 378 697 1060 Heteromita globosa strain ATCC 50780 actin (act) gene, partial cds blastn 37403 407 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
24503677 24503677 PRJNA1122875_P_NODE_41560_length_256_cov_1.617486_g41336_i0 PRJNA1122875 41560 256 1.617486 4.14076416 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 302 2.09e-77   NTclustered gi|302026154|gb|GQ377660.1| 188950 g41336 i0 87.891 86.890625 256 31 100 0 1 256 865 610 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 22244 302 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;