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contig_metadata

32 rows where analysis = "blastn", bioproject = "PRJNA1122875" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 32 ✖

bioproject 1

  • PRJNA1122875 · 32 ✖

analysis 1

  • blastn · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
277482 277482 PRJNA1122875_P_NODE_13761_length_449_cov_2.047872_g13537_i0 PRJNA1122875 13761 449 2.047872 9.19494528 Potyvirus telosmae 3240618 Viruses Viruses 830 0   NTclustered gi|2622038455|gb|OR786368.1| 400394 g13537 i0 100 99.5523385300668 449 0 100 0 1 449 1085 637 Telosma mosaic virus isolate TeMV-GX-FCG1 polyprotein gene, partial cds blastn 44699 830 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus telosmae
277552 277552 PRJNA1122875_P_NODE_1_length_7435_cov_16.765145_g0_i0 PRJNA1122875 1 7435 16.765145 1246.48853075 Camellia ringspot associated virus 3 2606571 Viruses Viruses 10595 0   NTclustered gi|1732260873|gb|MK050796.1| 2606571 g0 i0 92.444 2.11956960322798 7425 551 99 7 8 7430 7429 13 Camellia ringspot associated virus 3 isolate CJ5_807, complete genome blastn 15759 10595 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Camellia ringspot associated virus 3
277581 277581 PRJNA1122875_P_NODE_22721_length_348_cov_1.854545_g22497_i0 PRJNA1122875 22721 348 1.854545 6.4538166 Carlavirus lilii 3427777 Viruses Viruses 638 1.99e-178   NTclustered gi|2246792753|gb|MT882680.1| 12173 g22497 i0 99.713 26.9942528735632 348 1 100 0 1 348 191 538 Lily symptomless virus isolate L-B4 RNA-dependent RNA polymerase (RdRp), triple gene block protein 1 (tgb1), triple gene block protein 2 (tgb2), triple gene block protein 3 (tgb3), coat protein (cp), and 16 kDa protein (16kDa) genes, complete cds blastn 9394 638 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus lilii
1552207 1552207 PRJNA1122875_P_NODE_2_length_5768_cov_5.357155_g1_i0 PRJNA1122875 2 5768 5.357155 309.0007004 Lentinula eaodes hypovirus 2 2992848 Viruses Viruses 4004 0   NTclustered gi|2324991072|gb|OK636212.1| 2992848 g1 i0 79.242 1.00225381414702 5781 1174 100 26 1 5768 8429 2662 Lentinula eaodes hypovirus 2 isolate LED2-8 RNA-dependent RNA polymerase (RdRp) gene, complete cds blastn 5781 4004 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae Hypovirus Lentinula eaodes hypovirus 2
1552378 1552378 PRJNA1122875_P_NODE_4482_length_731_cov_0.975684_g4282_i0 PRJNA1122875 4482 731 0.975684 7.13225004 Carlavirus lilii 3427777 Viruses Viruses 1256 0   NTclustered gi|2430128996|gb|OM311167.1| 12173 g4282 i0 97.802 19.922024623803 728 16 99 0 1 728 1861 2588 Lily symptomless virus isolate LSV/BJ-3, complete genome blastn 14563 1256 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus lilii
1552471 1552471 PRJNA1122875_P_NODE_5162_length_691_cov_1.336570_g4953_i0 PRJNA1122875 5162 691 1.33657 9.2356987 Stralarivirus fragariae 3052753 Viruses Viruses 1253 0   NTclustered gi|2430128337|gb|OM311160.1| 28351 g4953 i0 99.421 6.28654124457308 691 3 100 1 1 691 2832 3521 Strawberry latent ringspot virus isolate SLRV/BJ, complete genome blastn 4344 1253 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Stralarivirus Stralarivirus fragariae
2828219 2828219 PRJNA1122875_P_NODE_24323_length_337_cov_1.261364_g24099_i0 PRJNA1122875 24323 337 1.261364 4.25079668 Carlavirus lilii 3427777 Viruses Viruses 601 2.52e-167   NTclustered gi|146188487|emb|AM263208.1| 12173 g24099 i0 98.813 20.4718100890208 337 4 100 0 1 337 3658 3994 Lily symptomless virus complete genome, isolate SMi blastn 6899 601 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus lilii
3579340 3579340 PRJNA1122875_P_NODE_29303_length_303_cov_1.004348_g29079_i0 PRJNA1122875 29303 303 1.004348 3.04317444 Orthorubulavirus 2560195 Viruses Viruses 560 3.79e-155   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g29079 i0 100 69.996699669967 303 0 100 0 1 303 1184 1486 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 21209 560 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
4104729 4104729 PRJNA1122875_P_NODE_33504_length_285_cov_1.028302_g33280_i0 PRJNA1122875 33504 285 1.028302 2.9306607 Stralarivirus fragariae 3052753 Viruses Viruses 520 6e-143   NTclustered gi|2430128337|gb|OM311160.1| 28351 g33280 i0 99.648 0.996491228070175 284 1 99 0 2 285 157 440 Strawberry latent ringspot virus isolate SLRV/BJ, complete genome blastn 284 520 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Stralarivirus Stralarivirus fragariae
4104875 4104875 PRJNA1122875_P_NODE_45444_length_249_cov_0.875000_g45220_i0 PRJNA1122875 45444 249 0.875 2.17875 Potyvirus citrulli 3240504 Viruses Viruses 416 6.939999999999999e-112   NTclustered gi|730091864|gb|KM597070.1| 146500 g45220 i0 96.787 99.9919678714859 249 8 100 0 1 249 9322 9570 Watermelon mosaic virus isolate RKG, complete genome blastn 24898 416 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus citrulli
6655367 6655367 PRJNA1122875_P_NODE_21606_length_357_cov_1.492958_g21382_i0 PRJNA1122875 21606 357 1.492958 5.32986006 Stralarivirus fragariae 3052753 Viruses Viruses 649 0   NTclustered gi|2430128337|gb|OM311160.1| 28351 g21382 i0 99.44 1 357 2 100 0 1 357 1611 1967 Strawberry latent ringspot virus isolate SLRV/BJ, complete genome blastn 357 649 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Stralarivirus Stralarivirus fragariae
6655378 6655378 PRJNA1122875_P_NODE_226_length_1753_cov_1.948214_g190_i0 PRJNA1122875 226 1753 1.948214 34.15219142 Camellia ringspot associated virus 2 2606570 Viruses Viruses 1991 0   NTclustered gi|1732260861|gb|MK050793.1| 2606570 g190 i0 87.172 8.62635482030804 1754 223 100 2 1 1753 4961 6713 Camellia ringspot associated virus 2 isolate CJ5-6003, complete genome blastn 15122 1991 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Camellia ringspot associated virus 2
7930420 7930420 PRJNA1122875_P_NODE_20147_length_371_cov_1.540268_g19923_i0 PRJNA1122875 20147 371 1.540268 5.71439428 Carlavirus lilii 3427777 Viruses Viruses 630 3.5599999999999985e-176   NTclustered gi|289467474|gb|GU440579.1| 12173 g19923 i0 97.305 19.9865229110512 371 10 100 0 1 371 3041 3411 Lily symptomless virus isolate LSV-jj, complete genome blastn 7415 630 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus lilii
9205573 9205573 PRJNA1122875_P_NODE_26988_length_318_cov_1.175510_g26764_i0 PRJNA1122875 26988 318 1.17551 3.7381218 Carlavirus lilii 3427777 Viruses Viruses 555 1.8599999999999998e-153   NTclustered gi|61273|emb|X15343.1| 12173 g26764 i0 98.113 40.8270440251572 318 6 100 0 1 318 1473 1156 Lily symptomless virus RNA 3-terminal region encoding 25kD, 12kD, 7kD, 16kD proteins and 32kD coat protein blastn 12983 555 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus lilii
9205666 9205666 PRJNA1122875_P_NODE_34728_length_281_cov_1.110577_g34504_i0 PRJNA1122875 34728 281 1.110577 3.12072137 Potyvirus sacchari 3240610 Viruses Viruses 514 2.75e-141   NTclustered gi|987898853|gb|KU171817.1| 12224 g34504 i0 99.644 100 281 1 100 0 1 281 9130 8850 Sugarcane mosaic virus isolate CN:HB:15, complete genome blastn 28100 514 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sacchari
9205931 9205931 PRJNA1122875_P_NODE_68_length_2396_cov_4.247955_g51_i0 PRJNA1122875 68 2396 4.247955 101.7810018 Carlavirus lilii 3427777 Viruses Viruses 4248 0   NTclustered gi|61273|emb|X15343.1| 12173 g51 i0 98.664 48.093489148581 2396 32 100 0 1 2396 2573 178 Lily symptomless virus RNA 3-terminal region encoding 25kD, 12kD, 7kD, 16kD proteins and 32kD coat protein blastn 115232 4248 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus lilii
11232119 11232119 PRJNA1122875_P_NODE_44929_length_249_cov_1.750000_g44705_i0 PRJNA1122875 44929 249 1.75 4.3575 Viruses 10239 Viruses Viruses 451 1.9e-122   NTclustered gi|1836405768|gb|MN905961.1| 1955144 g44705 i0 99.595 48.136546184739 247 1 99 0 3 249 7903 7657 MAG: Dicistroviridae sp. isolate coa196dic1 genomic sequence, sequence blastn 11986 451 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
11756001 11756001 PRJNA1122875_P_NODE_18590_length_387_cov_1.452229_g18366_i0 PRJNA1122875 18590 387 1.452229 5.62012623 Potyvirus pennisseti 3240587 Viruses Viruses 496 1.42e-135   NTclustered gi|451037263|gb|JX070150.1| 221262 g18366 i0 90.052 33.5271317829457 382 38 99 0 5 386 8380 7999 Pennisetum mosaic virus isolate CD2, complete genome blastn 12975 496 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus pennisseti
13031291 13031291 PRJNA1122875_P_NODE_28951_length_305_cov_1.327586_g28727_i0 PRJNA1122875 28951 305 1.327586 4.0491373 Potyvirus sacchari 3240610 Viruses Viruses 542 1.38e-149   NTclustered gi|1173652586|gb|KU886553.1| 12224 g28727 i0 98.689 85.6426229508197 305 4 100 0 1 305 8844 8540 Sugarcane mosaic virus isolate Yunan, complete genome blastn 26121 542 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sacchari
13031605 13031605 PRJNA1122875_P_NODE_6371_length_633_cov_1.708929_g6155_i0 PRJNA1122875 6371 633 1.708929 10.81752057 Potyvirus telosmae 3240618 Viruses Viruses 1144 0   NTclustered gi|2456538644|gb|ON932195.1| 400394 g6155 i0 99.522 59.3981042654028 628 3 99 0 1 628 9169 8542 Telosma mosaic virus isolate RJ, complete genome blastn 37599 1144 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus telosmae
13782141 13782141 PRJNA1122875_P_NODE_6471_length_629_cov_1.330935_g6255_i0 PRJNA1122875 6471 629 1.330935 8.37158115 Orthorubulavirus 2560195 Viruses Viruses 1151 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g6255 i0 99.682 86.268680445151 629 2 100 0 1 629 3026 2398 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 54263 1157 0.994814174589456 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
14306329 14306329 PRJNA1122875_P_NODE_16212_length_415_cov_1.532164_g15988_i0 PRJNA1122875 16212 415 1.532164 6.3584806 Carlavirus lilii 3427777 Viruses Viruses 726 0   NTclustered gi|2246792767|gb|MT882682.1| 12173 g15988 i0 98.309 26.9397590361446 414 7 99 0 1 414 1037 624 Lily symptomless virus isolate L-D9 RNA-dependent RNA polymerase (RdRp), triple gene block protein 1 (tgb1), triple gene block protein 2 (tgb2), triple gene block protein 3 (tgb3), coat protein (cp), and 16 kDa protein (16kDa) genes, complete cds blastn 11180 726 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus lilii
15056354 15056354 PRJNA1122875_P_NODE_17632_length_397_cov_3.101852_g17408_i0 PRJNA1122875 17632 397 3.101852 12.31435244 Cripavirus 144051 Viruses Viruses 370 9.24e-98   NTclustered gi|2672713331|gb|OR723603.1| 1955141 g17408 i0 100 48.6977329974811 200 0 88 0 198 397 2783 2982 MAG: Cripavirus sp. isolate JLLYH22/43627 genomic sequence blastn 19333 370 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus sp.
15580489 15580489 PRJNA1122875_P_NODE_30693_length_295_cov_1.040541_g30469_i0 PRJNA1122875 30693 295 1.040541 3.06959595 Lentinula edodes fusarivirus 2 2778977 Viruses Viruses 540 4.79e-149   NTclustered gi|1928162782|gb|MN744721.1| 2778977 g30469 i0 99.661 1.19661016949153 295 1 100 0 1 295 3799 3505 Lentinula edodes fusarivirus 2 isolate Le12Z84 RNA-dependent RNA polymerase gene, partial cds blastn 353 540 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Fusariviridae   Lentinula edodes fusarivirus 2
18129724 18129724 PRJNA1122875_P_NODE_8055_length_575_cov_1.486056_g7837_i0 PRJNA1122875 8055 575 1.486056 8.544822 Fushun polycipivirus 2 2905451 Viruses Viruses 1029 0   NTclustered gi|2169232387|gb|MZ210028.1| 2905451 g7837 i0 98.958 1.00173913043478 576 5 100 1 1 575 12006 11431 MAG: Fushun polycipivirus 2 isolate SBYYJFS21, complete genome blastn 576 1029 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Polycipiviridae   Fushun polycipivirus 2
19403560 19403560 PRJNA1122875_P_NODE_356_length_1577_cov_1.425532_g311_i0 PRJNA1122875 356 1577 1.425532 22.48063964 Carlavirus lilii 3427777 Viruses Viruses 2808 0   NTclustered gi|37674199|ref|NC_005138.1| 12173 g311 i0 98.795 23.147114774889 1577 19 100 0 1 1577 4150 5726 Lily symptomless virus, complete genome blastn 36503 2808 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus lilii
20678947 20678947 PRJNA1122875_P_NODE_20637_length_367_cov_0.952381_g20413_i0 PRJNA1122875 20637 367 0.952381 3.49523827 Carlavirus lilii 3427777 Viruses Viruses 667 0   NTclustered gi|37674199|ref|NC_005138.1| 12173 g20413 i0 99.455 20.0054495912807 367 2 100 0 1 367 2669 3035 Lily symptomless virus, complete genome blastn 7342 667 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus lilii
20679070 20679070 PRJNA1122875_P_NODE_30837_length_294_cov_1.045249_g30613_i0 PRJNA1122875 30837 294 1.045249 3.07303206 Potyvirus citrulli 3240504 Viruses Viruses 510 3.74e-140   NTclustered gi|2777077809|gb|PP505905.1| 146500 g30613 i0 97.959 99.7891156462585 294 6 100 0 1 294 7970 8263 Watermelon mosaic virus isolate EM170143, complete genome blastn 29338 510 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus citrulli
20679319 20679319 PRJNA1122875_P_NODE_52017_length_243_cov_0.888235_g51793_i0 PRJNA1122875 52017 243 0.888235 2.15841105 Cucumovirus CMV 3428131 Viruses Viruses 414 2.4299999999999998e-111   NTclustered gi|2644120974|gb|OR916009.1| 12305 g51793 i0 97.521 99.1069958847737 242 6 99 0 2 243 1406 1165 Cucumber mosaic virus isolate DHH segment RNA1, complete sequence blastn 24083 414 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Cucumovirus Cucumovirus CMV
23230245 23230245 PRJNA1122875_P_NODE_6439_length_630_cov_1.793537_g6223_i0 PRJNA1122875 6439 630 1.793537 11.2992831 Camellia ringspot associated virus 2 2606570 Viruses Viruses 859 0   NTclustered gi|1732260861|gb|MK050793.1| 2606570 g6223 i0 91.27 7.78888888888889 630 55 100 0 1 630 6787 7416 Camellia ringspot associated virus 2 isolate CJ5-6003, complete genome blastn 4907 859 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Camellia ringspot associated virus 2
24503363 24503363 PRJNA1122875_P_NODE_15380_length_426_cov_0.827195_g15156_i0 PRJNA1122875 15380 426 0.827195 3.5238507 Stralarivirus fragariae 3052753 Viruses Viruses 760 0   NTclustered gi|2430128337|gb|OM311160.1| 28351 g15156 i0 98.826 1 426 5 100 0 1 426 2193 2618 Strawberry latent ringspot virus isolate SLRV/BJ, complete genome blastn 426 760 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Stralarivirus Stralarivirus fragariae
24503413 24503413 PRJNA1122875_P_NODE_19280_length_380_cov_1.003257_g19056_i0 PRJNA1122875 19280 380 1.003257 3.8123766 Potyvirus sacchari 3240610 Viruses Viruses 691 0   NTclustered gi|987898853|gb|KU171817.1| 12224 g19056 i0 99.474 99.9657894736842 380 2 100 0 1 380 7108 7487 Sugarcane mosaic virus isolate CN:HB:15, complete genome blastn 37987 691 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sacchari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;