RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1122875" and tax_clade = "Metamonada"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Metamonada · 6 ✖

bioproject 1

  • PRJNA1122875 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
277794 277794 PRJNA1122875_P_NODE_41781_length_255_cov_1.692308_g41557_i0 PRJNA1122875 41781 255 1.692308 4.3153854 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.002   NTclustered gi|2794956356|ref|XM_067863009.1| 2049356 g41557 i0 100 3.55686274509804 30 0 12 0 88 117 628 657 Monocercomonoides exilis uncharacterized protein (MONOS_10550), mRNA blastn 907 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
2828279 2828279 PRJNA1122875_P_NODE_28663_length_307_cov_1.068376_g28439_i0 PRJNA1122875 28663 307 1.068376 3.27991432 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.002   NTclustered gi|2794948977|ref|XM_067875079.1| 2049356 g28439 i0 100 0.0977198697068404 30 0 10 0 141 170 1014 985 Monocercomonoides exilis uncharacterized protein (MONOS_4968), partial mRNA blastn 30 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
6655595 6655595 PRJNA1122875_P_NODE_42366_length_253_cov_1.555556_g42142_i0 PRJNA1122875 42366 253 1.555556 3.93555668 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 76.8 1.36e-9   NTclustered gi|2319602301|ref|XM_001302857.2| 412133 g42142 i0 85.714 0.462450592885375 77 5 28 2 63 133 109 33 Trichomonas vaginalis G3 alpha/beta gliadin family signature family (TVAGG3_0644320), partial mRNA blastn 117 76.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
14306464 14306464 PRJNA1122875_P_NODE_26752_length_319_cov_2.886179_g26528_i0 PRJNA1122875 26752 319 2.886179 9.20691101 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 6.43e-4   NTclustered gi|2794956900|ref|XM_067862706.1| 2049356 g26528 i0 100 1.32601880877743 31 0 10 0 116 146 1466 1436 Monocercomonoides exilis uncharacterized protein (MONOS_1027), partial mRNA blastn 423 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
15580822 15580822 PRJNA1122875_P_NODE_8933_length_551_cov_1.487448_g8714_i0 PRJNA1122875 8933 551 1.487448 8.19583848 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 359 2.8499999999999996e-94   NTclustered gi|339759383|dbj|AB600304.1| 926446 g8714 i0 81.128 82.7604355716878 461 75 83 12 1 455 824 1278 Ergobibamus cyprinoides gene for translation elongation factor 1 alpha, complete cds, strain: CL blastn 45601 359 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides
16854907 16854907 PRJNA1122875_P_NODE_33574_length_284_cov_2.118483_g33350_i0 PRJNA1122875 33574 284 2.118483 6.01649172 uncultured Oxymonadida sp. 413579 Preaxostyla other_Eukaryota 307 5.07e-79   NTclustered gi|119117132|gb|DQ925207.1| 413579 g33350 i0 86.525 62.5492957746479 282 35 99 3 3 282 107 387 Unidentified Oxymonadida clone R20 alpha-tubulin (Atub) mRNA, partial cds blastn 17764 307 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida     uncultured Oxymonadida sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;