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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA1120771" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA1120771 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1028550 1028550 PRJNA1120771_S_NODE_22161_length_251_cov_2.500000_g21761_i0 PRJNA1120771 22161 251 2.5 6.275 Naegleria 5761 Heterolobosea other_Eukaryota 464 2.47e-126   NTclustered gi|2618963742|gb|OR769034.1| 5762 g21761 i0 100 28.1155378486056 251 0 100 0 1 251 3874 3624 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 7057 464 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
2303847 2303847 PRJNA1120771_S_NODE_12442_length_311_cov_2.585821_g12042_i0 PRJNA1120771 12442 311 2.585821 8.04190331 Naegleria 5761 Heterolobosea other_Eukaryota 575 1.3899999999999995e-159   NTclustered gi|2618963742|gb|OR769034.1| 5762 g12042 i0 100 96.6205787781351 311 0 100 0 1 311 1630 1940 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 30049 575 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4103621 4103621 PRJNA1120771_S_NODE_15684_length_286_cov_2.950617_g15284_i0 PRJNA1120771 15684 286 2.950617 8.43876462 Allovahlkampfia sp. PKD 2011a 1217110 Heterolobosea other_Eukaryota 529 1e-145   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g15284 i0 100 25.8986013986014 286 0 100 0 1 286 215 500 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 7407 529 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
5379793 5379793 PRJNA1120771_S_NODE_27725_length_229_cov_2.118280_g27325_i0 PRJNA1120771 27725 229 2.11828 4.8508612 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 357 3.87e-94   NTclustered gi|290972987|ref|XM_002669186.1| 5762 g27325 i0 94.76 5.27510917030568 229 12 100 0 1 229 1757 1985 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56405), mRNA blastn 1208 357 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6131470 6131470 PRJNA1120771_S_NODE_9445_length_342_cov_9.662207_g9045_i0 PRJNA1120771 9445 342 9.662207 33.04474794 Naegleria 5761 Heterolobosea other_Eukaryota 627 4.22e-175   NTclustered gi|2618963742|gb|OR769034.1| 5762 g9045 i0 99.708 23.6111111111111 342 1 100 0 1 342 5438 5779 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 8075 627 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6654584 6654584 PRJNA1120771_S_NODE_6406_length_393_cov_2.185714_g6006_i0 PRJNA1120771 6406 393 2.185714 8.58985602 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 662 0   NTclustered gi|2515557648|gb|OR045415.1| 234921 g6006 i0 98.153 36.5394402035623 379 7 96 0 1 379 5419 5797 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 14360 662 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
9956591 9956591 PRJNA1120771_S_NODE_28888_length_225_cov_2.873626_g28488_i0 PRJNA1120771 28888 225 2.873626 6.4656585 Naegleria 5761 Heterolobosea other_Eukaryota 370 4.86e-98   NTclustered gi|2618963742|gb|OR769034.1| 5762 g28488 i0 100 88.8888888888889 200 0 89 0 26 225 264 463 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 20000 370 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14305465 14305465 PRJNA1120771_S_NODE_23832_length_244_cov_1.731343_g23432_i0 PRJNA1120771 23832 244 1.731343 4.22447692 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 396 8.829999999999997e-106   NTclustered gi|290974615|ref|XM_002669995.1| 5762 g23432 i0 95.902 4.18852459016393 244 10 100 0 1 244 1010 767 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_56383), mRNA blastn 1022 396 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14305569 14305569 PRJNA1120771_S_NODE_37152_length_200_cov_2.388535_g36752_i0 PRJNA1120771 37152 200 2.388535 4.77707 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 359 9.14e-95   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g36752 i0 99.005 14.585 201 1 100 1 1 200 3187 2987 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2917 359 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
16853778 16853778 PRJNA1120771_S_NODE_13934_length_298_cov_3.411765_g13534_i0 PRJNA1120771 13934 298 3.411765 10.1670597 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 534 2.26e-147   NTclustered gi|11466174|ref|NC_002573.1| 5762 g13534 i0 98.993 59.241610738255 298 3 100 0 1 298 898 1195 Naegleria gruberi mitochondrion, complete genome blastn 17654 534 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17606278 17606278 PRJNA1120771_S_NODE_4374_length_451_cov_5.867647_g3977_i0 PRJNA1120771 4374 451 5.867647 26.46308797 Naegleria 5761 Heterolobosea other_Eukaryota 809 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g3977 i0 99.113 99.940133037694 451 2 100 1 1 451 803 1251 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 45073 809 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
19402496 19402496 PRJNA1120771_S_NODE_27176_length_231_cov_0.925532_g26776_i0 PRJNA1120771 27176 231 0.925532 2.13797892 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 387 4.98e-103   NTclustered gi|290993545|ref|XM_002679348.1| 5762 g26776 i0 96.957 0.995670995670996 230 7 99 0 1 230 764 535 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_79118), partial mRNA blastn 230 387 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20677970 20677970 PRJNA1120771_S_NODE_10717_length_328_cov_2.540351_g10317_i0 PRJNA1120771 10717 328 2.540351 8.33235128 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 545 1.1599999999999999e-150   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g10317 i0 96.657 3.0030487804878 329 10 100 1 1 328 3988 3660 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 985 545 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
20678043 20678043 PRJNA1120771_S_NODE_20877_length_257_cov_1.219626_g20477_i0 PRJNA1120771 20877 257 1.219626 3.13443882 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 265 2.76e-66   NTclustered gi|290995447|ref|XM_002680261.1| 5762 g20477 i0 86.179 2.87937743190661 246 32 95 2 13 257 1075 831 Naegleria gruberi glutamate dehydrogenase (NAEGRDRAFT_78775), partial mRNA blastn 740 265 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23229051 23229051 PRJNA1120771_S_NODE_8419_length_357_cov_5.257962_g8019_i0 PRJNA1120771 8419 357 5.257962 18.77092434 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 643 4.379999999999998e-180   NTclustered gi|11466174|ref|NC_002573.1| 5762 g8019 i0 99.16 95.1344537815126 357 3 100 0 1 357 2319 2675 Naegleria gruberi mitochondrion, complete genome blastn 33963 643 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23980828 23980828 PRJNA1120771_S_NODE_32359_length_215_cov_1.674419_g31959_i0 PRJNA1120771 32359 215 1.674419 3.60000085 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 396 7.6e-106   NTclustered gi|2618963742|gb|OR769034.1| 5762 g31959 i0 100 79.6279069767442 214 0 99 0 2 215 3302 3089 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 17120 396 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;