RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1120771" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120771 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11755159 11755159 PRJNA1120771_S_NODE_2610_length_556_cov_3.715400_g2248_i0 PRJNA1120771 2610 556 3.7154 20.657624 Phototrophicaceae bacterium 3069543 Bacteria Bacteria 492 2.72e-134   NTclustered gi|2893356046|emb|OZ220469.1| 3069543 g2248 i0 84.078 100.080935251799 515 77 92 5 19 531 2201976 2202487 MAG: Phototrophicaceae bacterium isolate 149760b3-584d-4ebc-81cd-1236e649b30c genome assembly, chromosome: 1 blastn 55645 492 1 Bacteria   Bacillati Chloroflexota Candidatus Thermofontia Phototrophicales Phototrophicaceae   Phototrophicaceae bacterium
13030229 13030229 PRJNA1120771_S_NODE_11831_length_317_cov_1.587591_g11431_i0 PRJNA1120771 11831 317 1.587591 5.03266347 Tepidiforma bonchosmolovskayae 2601677 Bacteria Bacteria 52.8 0.03   NTclustered gi|1756502384|gb|CP042829.1| 2601677 g11431 i0 100 0.0883280757097792 28 0 9 0 94 121 947648 947621 Tepidiforma bonchosmolovskayae strain 3753O chromosome, complete genome blastn 28 52.8 1 Bacteria   Bacillati Chloroflexota Tepidiformia Tepidiformales Tepidiformaceae Tepidiforma Tepidiforma bonchosmolovskayae
19402557 19402557 PRJNA1120771_S_NODE_37056_length_200_cov_3.707006_g36656_i0 PRJNA1120771 37056 200 3.707006 7.414012 Phototrophicus methaneseepsis 2710758 Bacteria Bacteria 204 4.53e-48   NTclustered gi|1932369605|gb|CP062983.1| 2710758 g36656 i0 85 599.28 200 30 100 0 1 200 2827753 2827554 Phototrophicus methaneseepsis strain ZRK33 chromosome, complete genome blastn 119856 204 1 Bacteria   Bacillati Chloroflexota Candidatus Thermofontia Phototrophicales Phototrophicaceae Phototrophicus Phototrophicus methaneseepsis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;