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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1120771" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1120771 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10480314 10480314 PRJNA1120771_S_NODE_36169_length_203_cov_7.462500_g35769_i0 PRJNA1120771 36169 203 7.4625 15.148875 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.018   NTclustered gi|1145261118|ref|XM_012908592.2| 5854 g35769 i0 96.774 0.152709359605911 31 1 15 0 172 202 333 363 Plasmodium reichenowi GTP-binding protein, putative partial mRNA blastn 31 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
16331032 16331032 PRJNA1120771_S_NODE_9273_length_344_cov_20.877076_g8873_i0 PRJNA1120771 9273 344 20.877076 71.81714144 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 555 2.0299999999999995e-153   NTclustered gi|833494855|ref|XM_012915027.1| 5866 g8873 i0 95.714 1304.99709302326 350 6 99 3 4 344 205 554 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 448919 558 0.99462365591397806 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
19402397 19402397 PRJNA1120771_S_NODE_13756_length_299_cov_16.718750_g13356_i0 PRJNA1120771 13756 299 16.71875 49.9890625 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 553 6.25e-153   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g13356 i0 100 1420.46488294314 299 0 100 0 1 299 1596 1894 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 424719 553 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
21953471 21953471 PRJNA1120771_S_NODE_33078_length_213_cov_1.576471_g32678_i0 PRJNA1120771 33078 213 1.576471 3.35788323 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.019   NTclustered gi|916514430|ref|XM_013501872.1| 44415 g32678 i0 100 0.131455399061033 28 0 13 0 19 46 165 138 Eimeria mitis uncharacterized protein (EMH_0022030), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;