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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1120771" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA1120771 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1551287 1551287 PRJNA1120771_S_NODE_6622_length_388_cov_6.501449_g6222_i0 PRJNA1120771 6622 388 6.501449 25.22562212 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 56.5 0.003   NTclustered gi|470476036|ref|XM_004342168.1| 1257118 g6222 i0 100 0.368556701030928 30 0 8 0 80 109 556 527 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_115170), partial mRNA blastn 143 56.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4856564 4856564 PRJNA1120771_S_NODE_26984_length_231_cov_3.973404_g26584_i0 PRJNA1120771 26984 231 3.973404 9.17856324 Cochliopodium 313557 Discosea other_Eukaryota 274 4.05e-69   NTclustered gi|59876024|gb|AY785057.1| 313998 g26584 i0 90.233 33.6623376623377 215 14 90 6 24 231 247 461 Cochliopodium sp. strain Kiel 18S ribosomal RNA gene, partial sequence blastn 7776 274 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium sp. strain Kiel
5379695 5379695 PRJNA1120771_S_NODE_13905_length_298_cov_5.447059_g13505_i0 PRJNA1120771 13905 298 5.447059 16.23223582 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 451 2.34e-122   NTclustered gi|909719645|gb|KT185625.1| 5778 g13505 i0 96.043 38.7684563758389 278 10 93 1 22 298 5504 5781 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 11553 451 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
7929576 7929576 PRJNA1120771_S_NODE_33687_length_211_cov_2.726190_g33287_i0 PRJNA1120771 33687 211 2.72619 5.7522609 Acytostelium subglobosum 361139 Evosea other_Eukaryota 56.5 0.001   NTclustered gi|831758577|ref|XM_012893933.1| 1410327 g33287 i0 100 0.14218009478673 30 0 14 0 4 33 2857 2886 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 30 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
9204486 9204486 PRJNA1120771_S_NODE_10048_length_335_cov_2.458904_g9648_i0 PRJNA1120771 10048 335 2.458904 8.2373284 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 93.5 1.86e-14   NTclustered gi|470529098|ref|XM_004367958.1| 1257118 g9648 i0 88.608 0.653731343283582 79 5 23 3 221 297 1248 1172 Acanthamoeba castellanii str. Neff 4hydroxyphenylpyruvate dioxygenase (ACA1_290240), partial mRNA blastn 219 93.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9204534 9204534 PRJNA1120771_S_NODE_16028_length_284_cov_2.087137_g15628_i0 PRJNA1120771 16028 284 2.087137 5.92746908 Cavenderia fasciculata 261658 Evosea other_Eukaryota 158 5.4e-34   NTclustered gi|470264855|ref|XM_004361272.1| 261658 g15628 i0 78.279 1.71478873239437 244 53 86 0 41 284 697 940 Cavenderia fasciculata vacuolar protein sorting-associated protein 26 family protein (vps26l), partial mRNA blastn 487 158 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
10480350 10480350 PRJNA1120771_S_NODE_7309_length_375_cov_2.334337_g6909_i0 PRJNA1120771 7309 375 2.334337 8.75376375 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 643 4.629999999999999e-180   NTclustered gi|330902861|gb|JF298256.1| 1017091 g6909 i0 97.606 52.448 376 8 100 1 1 375 143 518 Cochliopodium larifeili clone 907 18S ribosomal RNA gene, partial sequence blastn 19668 643 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
10480369 10480369 PRJNA1120771_S_NODE_9949_length_336_cov_3.720137_g9549_i0 PRJNA1120771 9949 336 3.720137 12.49966032 Heterostelium album 2086695 Evosea other_Eukaryota 73.1 2.43e-8   NTclustered gi|1160570756|ref|XM_020574872.1| 670386 g9549 i0 83.333 0.232142857142857 78 13 23 0 256 333 537 460 Polysphondylium pallidum PN500 Rho GTPase (racB), partial mRNA blastn 78 73.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
11231856 11231856 PRJNA1120771_S_NODE_20829_length_257_cov_2.313084_g20429_i0 PRJNA1120771 20829 257 2.313084 5.94462588 Tubulinea 555369 Tubulinea other_Eukaryota 475 1.1699999999999999e-129   NTclustered gi|553062370|gb|KF470967.1| 5778 g20429 i0 100 99.9961089494163 257 0 100 0 1 257 62 318 Vermamoeba vermiformis strain Peru-1 18S ribosomal RNA gene, partial sequence blastn 25699 475 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
14305559 14305559 PRJNA1120771_S_NODE_35652_length_205_cov_3.888889_g35252_i0 PRJNA1120771 35652 205 3.888889 7.97222245 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 346 7.33e-91   NTclustered gi|659103926|gb|KJ569726.1| 1512276 g35252 i0 97.101 41.8243902439024 207 3 100 3 1 205 193 398 Cochliopodium kieliense clone 9605 18S ribosomal RNA gene, partial sequence blastn 8574 346 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
18128395 18128395 PRJNA1120771_S_NODE_34835_length_208_cov_5.066667_g34435_i0 PRJNA1120771 34835 208 5.066667 10.53866736 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 198 2.2099999999999998e-46   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g34435 i0 99.091 17.4567307692308 110 1 53 0 1 110 1116 1007 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 3631 198 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
21953383 21953383 PRJNA1120771_S_NODE_19838_length_262_cov_1.109589_g19438_i0 PRJNA1120771 19838 262 1.109589 2.90712318 Stemonaria longa 1258717 Evosea other_Eukaryota 313 9.93e-81   NTclustered gi|426281758|gb|JX681132.1| 1258717 g19438 i0 88.76 100.396946564885 258 25 97 4 1 255 832 576 Stemonaria longa actin gene, partial cds blastn 26304 313 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonaria Stemonaria longa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;